.

Some works using TREEFINDER:

  1. Abby SS, Tannier E, Gouy M, Daubin V. Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests. 2010. BMC Bioinformatics 11(1):324.
  2. Abby SS, Tannier E, Gouy M, Daubin V. Lateral gene transfer as a support for the tree of life. 2012. PNAS 109:4962-4967.
  3. Abdel-Basset R, Friedl T, Mohr KI, Rybalka N, Martin W. High growth rate, photosynthesis rate and increased hydrogen(ases) in manganese deprived cells of a newly isolated Nostoc-like cyanobacterium (SAG 2306). 2011. International J. Hydrogen Energy 36(19):12200-12210.
  4. Abe KT, Mariguela TC, Avelino GS, Castro R, Oliveira C. Multilocus molecular phylogeny of Gasteropelecidae (Ostariophysi: Characiformes) reveals the existence of an unsuspected diversity. 2013. Mol. Phylogenet. Evol. 0(0):???-???.
  5. Aikawa T, Anbutsu H, Nikoh N, Kikuchi T, Shibata F, Fukatsu T. Longicorn beetle that vectors pinewood nematode carries many Wolbachia genes on an autosome. 2009. Proc. Biol. Sci. 276(1674):3791-3798.
  6. Akanuma S, Nakajima Y, Yokobori S, Kimura M, Nemoto N, Mase T, Miyazono K, Tanokura M, Yamagishi A. Experimental evidence for the thermophilicity of ancestral life. 2013. PNAS 110:11067-11072.
  7. Aleshin VV, Mikhailov KV, Konstantinova AV, Nikitin MA, Rusin LY, Buinova DA, Kedrova OS, Petrov NB. On the phylogenetic position of insects in the Pancrustacea clade. 2009. Molecular Biology 43(5):866-881.
  8. Allegrucci G, Rampini M, Gratton P, Todisco V, Sbordoni V. Testing phylogenetic hypotheses for reconstructing the evolutionary history of Dolichopoda cave crickets in the eastern Mediterranean. 2009. Journal of Biogeography 36(9):1785-1797.
  9. Almeida FC, Giannini NP, DeSalle R, Simmons NB. Evolutionary relationships of the old world fruit bats (Chiroptera, Pteropodidae): Another star phylogeny? 2011. BMC Evolutionary Biology 11(1):281.
  10. Alstrom P, Davidson P, Duckworth JW, Eames JC, Le TT, Nguyen C, Olsson U, Robson C, Timmins R. Description of a new species of Phylloscopus warbler from Vietnam and Laos. 2009. Ibis 152(1):145-168.
  11. Alstrom P, Fjeldsa, J, Fregin S, Olsson U. Gross morphology betrays phylogeny: the Scrub Warbler Scotocerca inquieta is not a cisticolid. 2011. Ibis 153(1):87-97.
  12. Alstrom P, Fregin S, Norman JA, Ericson PG, Christidis L, Olsson U. Multilocus analysis of a taxonomically densely sampled dataset reveal extensive non-monophyly in the avian family Locustellidae. 2011. Mol. Phylogenet. Evol. 58(3):513-526.
  13. Alstrom P, Olsson U, Lei F, Wang HT, Gao W, Sundberg P. Phylogeny and classification of the Old World Emberizini (Aves, Passeriformes). 2008. Mol. Phylogenet. Evol. 47(3):960-973.
  14. Alstrom P, Saitoh T, Williams D, Nishiumi I, Shigeta Y, Ueda K, Irestedt M, Bjorklund M, Olsson U. The Arctic Warbler Phylloscopus borealis - three anciently separated cryptic species revealed. 2011. Ibis 153(2):395-410.
  15. Alvarez N, Benrey B, Hossaert-McKey M, Grill A, McKey D, Galtier N. Phylogeographic support for horizontal gene transfer involving sympatric bruchid species. 2006. Biol. Direct 1:21.
  16. Amaro RC, Cassimiro J, Verdade VK, Rodrigues MT. On the Generic Identity of Strabomantis aramunha Cassimiro, Verdade, and Rodrigues 2008 (Anura, Strabomantidae). 2013. J. Herpetology 0(0):???-???.
  17. Amaro RC, Rodrigues MT, Yonenaga-Yassuda Y, Carnaval AC. Demographic processes in the montane Atlantic rainforest: molecular and cytogenetic evidence from the endemic frog Proceratophrys boiei. 2012. Mol. Phylogenet. Evol. 62(3):880-888.
  18. Amouric A, Brochier-Armanet C, Johnson DB, Bonnefoy V, Hallberg KB. Phylogenetic and genetic variation among Fe(II)-oxidizing acidithiobacilli supports the view that these comprise multiple species with different ferrous iron oxidation pathways. 2011. Microbiology 157(Pt 1):111-122.
  19. Andreone F, Rosa GM, Noel J, Crottini A, Vences M, Raxworthy CJ. Living within fallen palm leaves: the discovery of an unknown Blommersia (Mantellidae: Anura) reveals a new reproductive strategy in the amphibians of Madagascar. 2010. Naturwissenschaften 97(6):525-543.
  20. Angelici FM, Cabras PA, Trucchi E. Records of crested porcupine, Hystrix cristata, in Sardinia. 2009. Mammalia 73(4):377-379.
  21. Anisimova M, Kosiol C. Investigating protein-coding sequence evolution with probabilistic codon substitution models. 2008. Mol. Biol. Evol. 26(2):255-271.
  22. Anker A, Baeza JA. Molecular and morphological phylogeny of hooded shrimps, genera Betaeus and Betaeopsis (Decapoda, Alpheidae): testing the center of origin biogeographic model and evolution of life history traits. 2012. Mol. Phylogenet. Evol. 0(0):???-???.
  23. Antonini G, Coletti G, Serrani L, Tronci C, Cristofaro M, Smith L. Using molecular genetics to identify immature specimens of the weevil Ceratapion basicorne (Coleoptera: Apionidae). 2009. Biological Control 51(1):152-157.
  24. Arp G, Bissett A, Brinkmann N, Cousin S, de Beer D, Friedl T, Mohr KI, Neu TR, Reimer A, Shiraishi F, Stackebrandt E, Zippel B. Tufa-forming biofilms of German karstwater streams: microorganisms, exopolymers, hydrochemistry and calcification. 2010. Geological Society, London, Special Publications 336:83-118.
  25. Arroyo JI, Hoffmann FG, Opazo JC. Gene duplication and positive selection explains unusual physiological roles of the relaxin gene in the European rabbit. 2012. J. Molecular Evolution 74(1-2):52-60.
  26. Arroyo JI, Hoffmann FG, Opazo JC. Gene turnover and differential retention in the relaxin/insulin-like gene family in primates. 2012. Mol. Phylogenet. Evol. 63(3):768-776.
  27. Asiimwe T, Krause K, Schlunk I, Kothe E. Modulation of ethanol stress tolerance by aldehyde dehydrogenase in the mycorrhizal fungus Tricholoma vaccinum. 2011. Mycorrhiza 22(6):471-484.
  28. Audisio P, Brustel H, Carpaneto GM, Coletti G, Mancini E, Trizzino M, Antonini G, DeBiase A. Data on molecular taxonomy and genetic diversification of the European Hermit beetles, a species complex of endangered insects (Coleoptera: Scarabaeidae, Cetoniinae, Osmoderma). 2009. J. Zool. Syst. Evol. Res. 47(1):88-95.
  29. Audisio P, Trizzino M, De Biase A, Rossetti G, Mancini E, Antonini G. Molecular and morphological evidence of a new sibling species of Calobius (Coleoptera: Hydraenidae) of the C. quadricollis complex from peninsular Italy. 2010. Italian Journal of Zoology 77(1):29-37.
  30. Audzijonyte A, Daneliya ME, Vainola R. Comparative phylogeography of Ponto-Caspian mysid crustaceans: isolation and exchange among dynamic inland sea basins. 2006. Molecular Ecology 15(10):2969–2984.
  31. Bachy C, Dolan JR, Lopez-Garcia P, Deschamps P, Moreira D. Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study. 2012. The ISME Journal 7(2):244-255.
  32. Bachy C, Gomez F, Lopez-Garcia P, Dolan JR, Moreira D. Molecular phylogeny of Tintinnid ciliates (Tintinnida, Ciliophora). 2012. Protist 163:873-887.
  33. Bachy C, Lopez-Garcia P, Vereshchaka A, Moreira D. Diversity and vertical distribution of microbial eukaryotes in the snow, sea ice and seawater near the north pole at the end of the polar night. 2011. Front. Microbiol. 2:106.
  34. Badali H, Carvalho VO, Vicente V, Attili-Angelis D, Kwiatkowski IB, Gerrits Van Den Ende AH, De Hoog GS. Cladophialophora saturnica sp. nov., a new opportunistic species of Chaetothyriales revealed using molecular data. 2008. Med. Mycol. 47(1):51-62.
  35. Baeza JA, Bolanos JA, Hernandez JE, Lopez R. A new species of Lysmata (Crustacea, Decapoda, Hippolytidae) from Venezuela, southeastern Caribbean Sea. 2009. Zootaxa 2240:60-68.
  36. Ball SG, Subtil A, Bhattacharya D, Moustafa A, Weber AP, Gehre L, ... Dauvillee D. 2013. Metabolic Effectors Secreted by Bacterial Pathogens: Essential Facilitators of Plastid Endosymbiosis? The Plant Cell Online 25(1):7-21.
  37. Bannikova AA, Lebedev VS, Lissovsky AA, Matrosova V, Abramson NI, Obolenskaya EV, Tesakov AS. Molecular phylogeny and evolution of the Asian lineage of vole genus Microtus (Rodentia: Arvicolinae) inferred from mitochondrial cytochrome b sequence. 2010. Biol. J. Linnean Society 99(3):595-613.
  38. Bannikova AA, Sizhazheva AM, Malikov VG, Golenishchev FN, Dzuev RI. ... (Mammalia, Arvicolinae) ... . 2013. Genetika 49(5):649-664.
  39. Barco A, Claremont M, Reid DG, Houart R, Bouchet P, Williams ST, Cruaud C, Couloux A, Oliverio M. A molecular phylogenetic framework for the Muricidae, a diverse family of carnivorous gastropods. 2010. Mol. Phylogenet. Evol. 56(3):1025-1039.
  40. Bataille A, Cunningham AA, Cedeno V, Patino L, Constantinou A, Kramer LD, Goodman SJ. Natural colonization and adaptation of a mosquito species in Galapagos and its implications for disease threats to endemic wildlife. 2009. Proc. Natl. Acad. Sci. USA 106(25):10230-10235.
  41. Beaufort L, Probert I, de Garidel-Thoron T, Bendif EM, Ruiz-Pino D, et al.. Sensitivity of coccolithophores to carbonate chemistry and ocean acidification. 2011. Nature 476:80-83.
  42. Baum BR, Johnson DA, Bailey GL. Ancient differentiation of the H and I haplomes in diploid Hordeum species based on 5S rDNA. 2005. Genome 48(4):610-618.
  43. Baurain D, Brinkmann H, Petersen J, Rodriguez-Ezpeleta N, Stechmann A, Demoulin V, Roger AJ, Burger G, Lang BF, Philippe H. Phylogenomic evidence for separate acquisition of plastids in cryptophytes, haptophytes and stramenopiles. 2010. Mol. Biol. Evol. 27(7):1698-1709.
  44. Baurain D, Brinkmann H, Philippe H. Lack of resolution in the animal phylogeny: closely spaced cladogeneses or undetected systematic errors? 2007. Mol. Biol. Evol. 24(1):6-9.
  45. Belinky F, Rot C, Ilan M, Huchon D. The complete mitochondrial genome of the demosponge Negombata magnifica (Poecilosclerida). 2008. Mol. Phylogenet. Evol. 47(3):1238-1243.
  46. Bendif EM, Probert I, Herve A, Billard C, Goux D, Lelong C, Cadoret JP, Veron B. Integrative taxonomy of the Pavlovophyceae (Haptophyta): a reassessment. 2011. Protist 162(5):738-761.
  47. Ben Hania W, Ghodbane R, Postec A, Brochier-Armanet C, Hamdi M, Fardeau ML, Ollivier B. Cultivation of the first mesophilic representative ("mesotoga") within the order Thermotogales. 2011. Syst. Appl. Microbiol. 34(8):581-585.
  48. Benzerara K, Chapon V, Moreira D, Lopez-Garcia P, Guyot F, Heulin T. Microbial diversity on the Tatahouine meteorite. 2006. Meteoritics and Planetary Science 41(8):1249–1265.
  49. Benziger A, Philip S, Raghavan R, Anvar Ali PH, Sukumaran M, et al.. Unraveling a 146 years old taxonomic puzzle: validation of Malabar snakehead, species-status and its relevance for channid systematics and evolution. 2011. PLoS ONE 6(6):e21272.
  50. Betancur-R. R, Li C, Munroe TA, Ballesteros JA, Orti G. Addressing gene tree discordance and non-stationarity to resolve a multi-locus phylogeny of the flatfishes (Teleostei: Pleuronectiformes). 2013. Syst. Biol. 62:763-785.
  51. Biedrzycka A, Kloch A, Migalska M, Bielanski W. Molecular characterization of putative Hepatozoon sp. from the sedge warbler (Acrocephalus schoenobaenus). 2013. Parasitology 1-4.
  52. Biggs JS, Watkins M, Puillandre N, Ownby JP, Lopez-Vera E, Christensen S, Moreno KJ, Bernaldez J, Licea-Navarro A, Corneli PS, Olivera BM. Evolution of Conus peptide toxins: Analysis of Conus californicus Reeve, 1844. 2010. Mol. Phylogenet. Evol. 56(1):1-12.
  53. Biruma M, Martin T, Fridborg I, Okori P, Dixelius C. Two loci in sorghum with NB-LRR encoding genes confer resistance to Colletotrichum sublineolum. 2012. TAG Theoretical and Applied Genetics 124(6):1005-1015.
  54. Blanga-Kanfi S, Miranda H, Penn O, Pupko T, DeBry RW, Huchon D. Rodent phylogeny revised: analysis of six nuclear genes from all major rodent clades. 2009. BMC Evol. Biol. 9:71.
  55. Blank M, Bastrop R. Phylogeny of the mud worm genus Marenzelleria (Polychaeta, Spionidae) inferred from mitochondrial DNA sequences. 2009. Zoologica Scripta 38(3):313-321.
  56. Blank M, Jurss K, Bastrop R. A mitochondrial multigene approach contributing to the systematics of the brook and river lampreys and the phylogenetic position of Eudontomyzon mariae. 2008. Canadian Journal of Fisheries and Aquatic Sciences 65(12):2780-2790.
  57. Blower TR, Short FL, Rao F, Mizuguchi K, Pei XY, Fineran PC, Luisi BF, Salmond GPC. Identification and classification of bacterial Type III toxin–antitoxin systems encoded in chromosomal and plasmid genomes. 2012. Nucleic Acids Res. 40:6158-6173.
  58. Bobay LM, Rocha EP, Touchon M. The adaptation of temperate bacteriophages to their host genomes. 2013. Mol. Biol. Evol. 30(4):737-751.
  59. Bodyl A, Mackiewicz P, Stiller JW. Comparative genomic studies suggest that the cyanobacterial endosymbionts of the amoeba Paulinella chromatophora possess an import apparatus for nuclear-encoded proteins. 2009. Plant Biology 0(0):???-???.
  60. Boeckmann B, Robinson-Rechavi M, Xenarios I, Dessimoz C. Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees. 2011. Brief Bioinform. 12:423-435.
  61. Boileau C, Eme L, Brochier-Armanet C, Janicki A, Zhang CC, Latifi A. A eukaryotic-like sulfiredoxin involved in oxidative stress responses and in the reduction of the sulfinic form of 2-Cys peroxiredoxin in the cyanobacterium Anabaena PCC 7120. 2011. New Phytologist 191(4):1108-1118.
  62. Bologna MA, Oliverio M, Pitzalis M, Mariottini P. Phylogeny and evolutionary history of the blister beetles (Coleoptera, Meloidae). 2008. Mol. Phylogenet. Evol. 48(2):679-693.
  63. Bondre VP, Sapkal GN, Yergolkar PN, Fulmali PV, Sankararaman V, Ayachit VM, Mishra AC, Gore MM. Genetic characterization of Bagaza virus (BAGV) isolated in India and evidence of anti-BAGV antibodies in sera collected from encephalitis patients. 2009. J. Gen. Virol. 90(Pt 11):2644-2649.
  64. Borden WC, Krebs RA. Phylogeography and postglacial dispersal of smallmouth bass (Micropterus dolomieu) into the Great Lakes. 2009. Can. J. Fish. Aquat. Sci. 66(12):2142-2156.
  65. Borrel G, O'Toole PW, Harris HM, Peyret P, Brugere JF, Gribaldo S. Phylogenomic data support a seventh order of methylotrophic methanogens and provide insights into the evolution of methanogenesis. 2013. Genome Biology and Evolution, evt128.
  66. Bourlat SJ, Juliusdottir T, Lowe CJ, Freeman R, Aronowicz J, Kirschner M, Lander ES, Thorndyke M, Nakano H, Kohn AB, Heyland A, Moroz LL, Copley RR, Telford MJ. Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida. 2006. Nature 444:85-88.
  67. Boussau B, Gouy M. What genomes have to say about the evolution of the Earth. 2012. Gondwana Research 21(2–3):483-494.
  68. Boyer M, Gimenez G, Suzan-Monti M, Raoult D. Classification and determination of possible origins of ORFans through analysis of nucleocytoplasmic large DNA viruses. 2010. Intervirology 53:310-320.
  69. Boyer M, Yutin N, Pagnier I, Barrassi L, Fournous G, Espinosa L, Robert C, Azza S, Sun S, Rossmann MG, Suzan-Monti M, La Scola B, Koonin EV, Raoult D. Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms. 2009. Proc. Natl. Acad. Sci. USA 106(51):21848-21853.
  70. Braband A, Cameron SL, Podsiadlowski L, Daniels SR, Mayer G. The mitochondrial genome of the onychophoran Opisthopatus cinctipes (Peripatopsidae) reflects the ancestral mitochondrial gene arrangement of Panarthropoda and Ecdysozoa. 2010. Mol. Phylogenet. Evol. 57(1):285-292.
  71. Bradley ME, Rest JS, Li WH, Schwartz NB. Sulfate activation enzymes: phylogeny and association with pyrophosphatase. 2009. J. Mol. Evol. 68(1):1-13.
  72. Brandao SN, Sauer J, Schon I. Circumantarctic distribution in Southern Ocean benthos? A genetic test using the genus Macroscapha (Crustacea, Ostracoda) as a model. 2010. Mol. Phylogenet. Evol. 55(3):1055-1069.
  73. Briee C, Moreira D, Lopez-Garcia P. Archaeal and bacterial community composition of sediment and plankton from a suboxic freshwater pond. 2007. Res. Microbiol. 158(3):213-227.
  74. Brindefalk B, Viklund J, Larsson D, Thollesson M, Andersson SG. Origin and evolution of the mitochondrial aminoacyl-tRNA synthetases. 2007. Mol. Biol. Evol. 24(3):743-756.
  75. Brinkmann H, Philippe H. Animal phylogeny and large-scale sequencing: progress and pitfalls. 2008. J. Syst. Evol. 46(3):274–286.
  76. Brochier-Armanet C, Deschamps P, Lopez-Garcia P, Zivanovic Y, Rodriguez-Valera F, et al.. Complete-fosmid and fosmid-end sequences reveal frequent horizontal gene transfers in marine uncultured planktonic archaea. 2011. The ISME Journal 5:1291-1302.
  77. Brouard JS, Otis C, Lemieux C, Turmel M. The exceptionally large chloroplast genome of the green alga Floydiella terrestris illuminates the evolutionary history of the Chlorophyceae. 2010. Genome Biol. Evol. 2:240-256.
  78. Brouard JS, Otis C, Lemieux C, Turmel M. The chloroplast genome of the green alga Schizomeris leibleinii (Chlorophyceae) provides evidence for bidirectional DNA replication from a single origin in the Chaetophorales. 2011. Genome Biol. Evol. 3:505-515.
  79. Brown DM, Brenneman RA, Koepfli KP, Pollinger JP, Mila B, Georgiadis NJ, Louis EE, Grether GF, Jacobs DK, Wayne RK. Extensive population genetic structure in the giraffe. 2007. BMC Biology 5:57.
  80. Burki F, Inagaki Y, Brate J, Archibald JM, Keeling PJ, Cavalier-Smith T, Sakaguchi M, Hashimoto T, Horak A, Kumar S, Klaveness D, Jakobsen KS, Pawlowski J, Shalchian-Tabrizi K. Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, Telonemia and Centroheliozoa, are related to photosynthetic Chromalveolates. 2009. Gen. Biol. Evol. 2009:231-238.
  81. Burki F, Pawlowski J. Monophyly of rhizaria and multigene phylogeny of unicellular bikonts. 2006. Mol. Biol. Evol. 23(10):1922-1930.
  82. Burki F, Shalchian-Tabrizi K, Minge M, Skjaeveland A, Nikolaev SI, Jakobsen KS, Pawlowski J. Phylogenomics reshuffles the eukaryotic supergroups. 2007. PLoS ONE 2(8):e790.
  83. Burki F, Shalchian-Tabrizi K, Pawlowski J. Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes. 2008. Biol. Lett. 4(4):366-369.
  84. Buschiazzo E, Gemmell NJ. Evolutionary and phylogenetic significance of platypus microsatellites conserved in mammalian and other vertebrate genomes. 2009. Australian Journal of Zoology 57(4):175-184.
  85. Caikovski M, Yokthongwattana C, Habu Y, Nishimura T, Mathieu O, Paszkowski J. Divergent evolution of CHD3 proteins resulted in MOM1 refining epigenetic control in vascular plants. 2008. PLoS Genet. 4(8):e1000165.
  86. Calderon I, Turon X, Lessios HA. Characterization of the sperm molecule bindin in the sea urchin genus Paracentrotus. 2009. J. Mol. Evol. 68(4):366-376.
  87. Calderon I, Ventura CR, Turon X, Lessios HA. Genetic divergence and assortative mating between colour morphs of the sea urchin Paracentrotus gaimardi. 2010. Mol. Ecol. 19(3):484-493.
  88. Calenda G, Peng J, Redman CM, Sha Q, Wu X, Lee S. Identification of two new members, XPLAC and XTES, of the XK family. 2006. Gene 370:6-16.
  89. Califice S, Baurain D, Hanikenne M, Motte P. A single ancient origin for prototypical serine/arginine-rich splicing factors. 2012. Plant Physiology 158:546-560.
  90. Calvo M, Templado J, Oliverio M, Machordom A. Hidden Mediterranean biodiversity: molecular evidence for a cryptic species complex within the reef building vermetid gastropod Dendropoma petraeum (Mollusca: Caenogastropoda). 2009. Biological Journal of the Linnean Society 96(4):898-912.
  91. Cardoso YP, Brancolini F, Protogino L, Lizarralde M. Actinopterygii, Siluriformes, Loricariidae, Hypostomus aspilogaster (Cope, 1894). Distribution extension and first record for Argentina. 2011. Check List J. species lists and distribution 7(5):596-598.
  92. Cardoso YP, Montoya-Burgos JI. Unexpected diversity in the catfish Pseudancistrus brevispinis reveals dispersal routes in a Neotropical center of endemism: the Guyanas Region. 2009. Molecular Ecology 18(5):947-964.
  93. Carlos F, Suarez M, Patarroyo MA, Patarroyo ME. Characterisation and comparative analysis of MHC-DPA1 exon 2 in the owl monkey (Aotus nancymaae). 2011. Gene 470(1–2):37-45.
  94. Carvalho-Costa LF, Piorski NM, Willis SC, Galetti PM, Orti G. Molecular systematics of the neotropical shovelnose catfish genus Pseudoplatystoma Bleeker 1862 based on nuclear and mtDNA markers. 2011. Mol. Phylogenet. Evol. 59(1):177-194.
  95. Caspersen CS, Reznik B, Weldy PL, Abildskov KM, Stark RI, Garland M. Molecular cloning of the baboon UDP-glucuronosyltransferase 1A gene family: Evolution of the primate UGT1 locus and relevance for models of human drug metabolism. 2007. Pharmacogenetics and Genomics 17(1):11-24.
  96. Cavalier-Smith T, Chao EE, Stechmann A, Oates B, Nikolaev S. Planomonadida ord. nov. (Apusozoa): ultrastructural affinity with Micronuclearia podoventralis and deep divergences within Planomonas gen. nov.. 2008. Protist 159(4):535-562.
  97. Cavalier-Smith T, Lewis R, Chao EE, Oates B, Bass D. Morphology and phylogeny of Sainouron acronematica sp. n. and the ultrastructural unity of Cercozoa. 2008. Protist 159(4):591-620.
  98. Cech G, Csuzdi C, Marialigeti K. Remarks on the molecular phylogeny of the genus Dendrobaena (sensu Pop 1941) based on the investigation of 18S rDNA sequences. 2006. Advances in Earthworm Taxonomy II, Univ. Press, Cluj, pp. 85-98.
  99. Cetre-Sossah C, Zeller H, Grandadam M, Caro V, Pettinelli F, Bouloy M, ... Albina E. Genome analysis of Rift Valley fever virus, Mayotte. 2012. Emerging infectious diseases 18(6):969.
  100. Charlat S, Duplouy A, Hornett EA, Dyson EA, Davies N, Roderick GK, Wedell N, Hurst GD. The joint evolutionary histories of Wolbachia and mitochondria in Hypolimnas bolina. 2009. BMC Evol. Biol. 9:64.
  101. Charruau P, Fernandes C, Orozco-Terwengel P, Peters J, Hunter L, Ziaie H, Jourabchian A, Jowkar H, Schaller G, Ostrowski S, Vercammen P, Grange T, Schlotterer C, Kotze A, Geigl EM, Walzer C, Burger PA. Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term geographic isolates. 2011. Mol. Ecol. 20(4):706-724.
  102. Cherian SS, Walimbe AM, Jadhav SM, Gandhe SS, Hundekar SL, Mishra AC, Arankalle VA. Evolutionary rates and timescale comparison of Chikungunya viruses inferred from the whole genome/E1 gene with special reference to the 2005-07 outbreak in the Indian subcontinent. 2009. Infect. Genet. Evol. 9(1):16-23.
  103. Chiachio MC, Oliveira C, Montoya-Burgos JI. Molecular systematic and historical biogeography of the armored Neotropical catfishes Hypoptopomatinae and Neoplecostominae (Siluriformes: Loricariidae). 2008. Mol. Phylogenet. Evol. 49(2):606-617.
  104. Cocquyt E, Gile GH, Leliaert F, Verbruggen H, Keeling PJ, et al.. Complex phylogenetic distribution of a non-canonical genetic code in green algae. 2010. BMC Evolutionary Biology 10(1):327.
  105. Cocquyt E, Verbruggen H, Leliaert F, De Clerck O. Evolution and cytological diversification of the green seaweeds (Ulvophyceae). 2010. Mol. Biol. Evol. 27(9):2052-2061.
  106. Cocquyt E, Verbruggen H, Leliaert F, Zechman FW, Sabbe K, De Clerck O. Gain and loss of elongation factor genes in green algae. 2009. BMC Evol. Biol. 9(1):39.
  107. Colleoni C, Linka M, Deschamps P, Handford MG, Dupree P, Weber AP, Ball SG. Phylogenetic and biochemical evidence supports the recruitment of an ADP-glucose translocator for the export of photosynthate during plastid endosymbiosis. 2010. Mol. Biol. Evol. 27(12):2691-2701.
  108. Collins RA. Borna disease virus and mental illness. 2004. The Biomedical Scientist, November 2004.
  109. Colson P, Yutin N, Shabalina SA, Robert C, Fournous G, La Scola B, Raoult D, Koonin EV. Viruses with more than 1,000 genes: mamavirus, a new Acanthamoeba polyphaga mimivirus strain, and reannotation of mimivirus genes. 2011. Genome Biol. Evol. 3:737-742.
  110. Correa PG, Oguiura N. Phylogenetic analysis of ß-defensin-like genes of Bothrops, Crotalus and Lachesis snakes. 2013. Toxicon 0(0):???-???.
  111. Corsaro D, Michel R, Walochnik J, Muller KD, Greub G. Saccamoeba lacustris, sp. nov. (Amoebozoa: Lobosea: Hartmannellidae), a new lobose amoeba, parasitized by the novel chlamydia 'Candidatus Metachlamydia lacustris' (Chlamydiae: Parachlamydiaceae). 2010. Eur. J. Protistol. 46(2):86-95.
  112. Corsaro D, Venditti D. Detection of Chlamydiae from freshwater environments by PCR, amoeba coculture and mixed coculture. 2009. Research in Microbiology 160(8):547-552.
  113. Corsaro D, Venditti D. Phylogenetic evidence for a new genotype of Acanthamoeba (Amoebozoa, Acanthamoebida). 2010. Parasitol. Res. 0(0):???-???.
  114. Couradeau E, Benzerara K, Gerard E, Moreira D, Bernard S, Brown GE, Lopez-Garcia P. An early-branching microbialite cyanobacterium forms intracellular carbonates. 2012. Science 336:459-462.
  115. Crone EJ, Zera AJ, Anand A, Oakeshott JG, Sutherland TD, Russell RJ, Harshman LG, Hoffmann FG, Claudianos C. Jhe in Gryllus assimilis: cloning, sequence-activity associations and phylogeny. 2007. Insect Biochem. Mol. Biol. 37(12):1359-1365.
  116. Crosbie ND, Pockl M, Weisse T. Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses. 2003. Appl. Environ. Microbiol. 69(9):5716-5721.
  117. Crottini A, Dordel J, Kohler J, Glaw F, Schmitz A, Vences M. A multilocus phylogeny of Malagasy scincid lizards elucidates the relationships of the fossorial genera Androngo and Cryptoscincus. 2009. Mol. Phylogenet. Evol. 53(1):345-350.
  118. Dabert M, Witalinski W, Kazmierski A, Olszanowski Z, Dabert J. Molecular phylogeny of acariform mites (Acari, Arachnida): Strong conflict between phylogenetic signal and long-branch attraction artifacts. 2010. Mol. Phylogenet. Evol. 56(1):222-241.
  119. DaCosta JM, Klicka J. The Great American Interchange in birds: a phylogenetic perspective with the genus Trogon. 2008. Molecular Ecology 17(5):1328–1343.
  120. DaCosta JM, Spellman GM, Escalante P, Klicka J. A molecular systematic revision of two historically problematic songbird clades: Aimophila and Pipilo. 2009. Journal of Avian Biology 40(2):206-216.
  121. Dadheech PK, Mahmoud H, Kotut K, Krienitz L. Haloleptolyngbya alcalis gen. et sp. nov., a new filamentous cyanobacterium from the soda lake Nakuru, Kenya. 2012. Hydrobiologia 691(1):269-283.
  122. Dai SX, Zhang AD, Huang JF. Evolution, expansion and expression of the Kunitz/BPTI gene family associated with long-term blood feeding in Ixodes Scapularis. 2012. BMC Evolutionary Biology 12(1):4.
  123. Darriba D, Taboada GL, Doallo R, Posada D. ProtTest-HPC: fast selection of best-fit models of protein evolution. 2011. Lecture Notes in Computer Science 6586:177-184.
  124. Dayal A, Bhat V, Franzini-Armstrong C, Grabner M. Domain cooperativity in the beta-1a subunit is essential for dihydropyridine receptor voltage sensing in skeletal muscle. 2013. PNAS 110:7488-7493.
  125. Daza JM, Smith EN, Paez VP, Parkinson CL. Complex evolution in the Neotropics: The origin and diversification of the widespread genus Leptodeira (Serpentes: Colubridae). 2009. Mol. Phylogenet. Evol. 53(3):653-667.
  126. De Biase A, Antonini G, Mancini E, Trizzino M, Cline A, et al.. Discordant patterns in the genetic, ecological, and morphological diversification of a recently radiated phytophagous beetle clade (Coleoptera: Nitidulidae: Meligethinae). 2012. Rendiconti Lincei 23(2):207-215.
  127. de Crecy-Lagard V, Brochier-Armanet C, Urbonavicius J, Fernandez B, Phillips G, Lyons B, Noma A, Alvarez S, Droogmans L, Armengaud J, Grosjean H. Biosynthesis of wyosine derivatives in tRNA: an ancient and highly diverse pathway in Archaea. 2010. Mol. Biol. Evol. 27(9):2062-2077.
  128. de Farias ST, Guimaraes RC. Aminoacyl-tRNA synthetase classes and groups in prokaryotes. 2008. J. Theor. Biol. 250(2):221-229.
  129. de Paula TS, Zilberberg C, Hajdu E, Lobo-Hajdu G. Morphology and molecules on opposite sides of the diversity gradient: four cryptic species of the Cliona celata (Porifera, Demospongiae) complex in South America revealed by mitochondrial and nuclear markers. 2012. Mol. Phylogenet. Evol. 62(1):529-541.
  130. Delaney KS, Zafar S, Wayne RK. Genetic divergence and differentiation within the western scrub-jay (Aphelocoma californica). 2008. The Auk 125(4):839-849.
  131. Del Castillo H, Vernot JP. Characterizing the CD3 epsilon chain from the New World primate Aotus nancymaae. Biomedica 28(2):262-270.
  132. Delsuc F, Brinkmann H, Chourrout D, Philippe H. Tunicates and not cephalochordates are the closest living relatives of vertebrates. 2006. Nature 439:965–968.
  133. Delsuc F, Tsagkogeorga G, Lartillot N, Philippe H. Additional molecular support for the new chordate phylogeny. 2008. Genesis 46(11):592-604.
  134. Demma LJ, Vanderford TH, Logsdon JM Jr, Feinberg MB, Staprans SI. Evolution of the uniquely adaptable lentiviral envelope in a natural reservoir host. 2006. Retrovirology 3:19.
  135. Demma LJ, Logsdon JM Jr, Vanderford TH, Feinberg MB, Staprans SI. SIVsm quasispecies adaptation to a new simian host. 2005. PLoS Pathog. 1(1):e3.
  136. Demonchy R, Blisnick T, Deprez C, Toutirais G, Loussert C, Marande W, Grellier P, Bastin P, Kohl L. Kinesin 9 family members perform separate functions in the trypanosome flagellum. 2009. J. Cell Biol. 187(5):615-622.
  137. Deng S, Bulmer GS, Summerbell RC, De Hoog GS, Hui Y, Graser Y. Changes in frequency of agents of tinea capitis in school children from Western China suggest slow migration rates in dermatophytes. 2008. Med. Mycol. 46(5):421-427.
  138. Depege-Fargeix N, Javelle M, Chambrier P, Frangne N, Gerentes D, Perez P, Rogowsky PM, Vernoud V. Functional characterization of the HD-ZIP IV transcription factor OCL1 from maize. 2010. J. Exp. Bot. 62:293-305.
  139. Dermauw W, Ilias A, Riga M, Tsagkarakou A, Grbic M, Tirry L, Van Leeuwen T, Vontas J. The cys-loop ligand-gated ion channel gene family of Tetranychus urticae: implications for acaricide toxicology and a novel mutation associated with abamectin resistance. 2012. Insect Biochemistry and Molecular Biology 42(7):455-465.
  140. Dermauw W, Osborne EJ, Clark RM, Grbi M, Tirry L, Van Leeuwen T. A burst of ABC genes in the genome of the polyphagous spider mite Tetranychus urticae. 2013. BMC Genomics 14(1):317.
  141. Dermauw W, Vanholme B, Tirry L, Van Leeuwen T. Mitochondrial genome analysis of the predatory mite Phytoseiulus persimilis and a revisit of the Metaseiulus occidentalis mitochondrial genome. 2010. Genome 53(4):285-301.
  142. Dermauw W, Van Leeuwen T, Vanholme B, Tirry L. The complete mitochondrial genome of the house dust mite, Dermatophagoides pteronyssinus (Trouessart): a novel gene arrangement among arthropods. 2009. BMC Genomics 10:107.
  143. Dermauw W, Wybouw N, Rombauts S, Menten B, Vontas J, Grbic M, ... Van Leeuwen T. A link between host plant adaptation and pesticide resistance in the polyphagous spider mite Tetranychus urticae. 2013. Proceedings of the National Academy of Sciences 110(2):E113-E122.
  144. Deschamps P, Moreira D. Signal conflicts in the phylogeny of the primary photosynthetic eukaryotes. 2009. Mol. Biol. Evol. 26(12):2745-2753.
  145. Desnues C, La Scola B, Yutin N, Fournous G, Robert C, Azza S, ... Raoult D. Provirophages and transpovirons as the diverse mobilome of giant viruses. 2012. Proceedings of the National Academy of Sciences 109(44):18078-18083.
  146. Devier B, Aguileta G, Hood ME, Giraud T. Ancient trans-specific polymorphism at pheromone receptor genes in Basidiomycetes. 2009. Genetics 181(1):209-223.
  147. Diavatopoulos DA, Hijnen M, Mooi FR. Adaptive evolution of the Bordetella autotransporter pertactin. 2006. J. Evol. Biol. 19(6):1931-1938.
  148. Dimitrov D, Arnedo MA, Ribera C. Colonization and diversification of the spider genus Pholcus Walckenaer, 1805 (Araneae, Pholcidae) in the Macaronesian archipelagos: evidence for long-term occupancy yet rapid recent speciation. 2008. Mol. Phylogenet. Evol. 48(2):596-614.
  149. Dohrmann M, Gocke C, Janussen D, Reitner J, Luter C, Worheide G. Systematics and spicule evolution in dictyonal sponges (Hexactinellida: Sceptrulophora) with description of two new species. 2011. Zoological J. Linnean Society 163:1003-1025.
  150. Domingo-Roura X, Lopez-Giraldez F, Saeki M, Marmi J. Phylogenetic inference and comparative evolution of a complex microsatellite and its flanking regions in carnivores. 2005. Genet. Res. 85(3):223-233.
  151. Dordel J, Fisse F, Purschke G, Struck TH. Phylogenetic position of Sipuncula derived from multi-gene and phylogenomic data and its implication for the evolution of segmentation. 2010. J. Zool. Syst. Evol. Res. 48(3):197-207.
  152. Douglas DA. The molecular evolution of snakes as revealed by mitogenomic data. 2008. Dissertation, Lund University.
  153. Douglas DA, Arnason U. Examining the utility of categorical models and alleviating artifacts in phylogenetic reconstruction of the Squamata (Reptilia). 2009. Mol. Phylogenet. Evol. 52(3):784-796.
  154. Douglas DA, Gower DJ. Snake mitochondrial genomes: phylogenetic relationships and implications of extended taxon sampling for interpretations of mitogenomic evolution. 2010. BMC Genomics 11:14.
  155. Douglas DA, Janke A, Arnason U. A mitogenomic study on the phylogenetic position of snakes. 2006. Zoologica Scripta 35(6):545-558.
  156. Dubey B, Meganathan PR, Haque I. Complete mitochondrial genome sequence from an endangered Indian snake, Python molurus molurus (Serpentes, Pythonidae). 2012. Molecular Biology Reports 39(7):7403-7412.
  157. Duperron S. Symbioses bacteriennes de bivalves mytilides associes aux sources de fluides en domaine oceanique profond : diversite, role nutritionnel et influence de l'environnement. 2005. These, Universite Paris 6.
  158. Duperron S, Bergin C, Zielinski F, Blazejak A, Pernthaler A, McKiness ZP, DeChaine E, Cavanaugh CM, Dubilier N. A dual symbiosis shared by two mussel species, Bathymodiolus azoricus and Bathymodiolus puteoserpentis (Bivalvia: Mytilidae), from hydrothermal vents along the northern Mid-Atlantic Ridge. 2006. Environ. Microbiol. 8(8):1441-1447.
  159. Duperron S, Fiala-Medioni A, Caprais JC, Olu K, Sibuet M. Evidence for chemoautotrophic symbiosis in a Mediterranean cold seep clam (Bivalvia: Lucinidae): comparative sequence analysis of bacterial 16S rRNA, APS reductase and RubisCO genes. 2006. FEMS Microbiology Ecology 59(1):64.
  160. Duperron S, Nadalig T, Caprais JC, Sibuet M, Fiala-Medioni A, Amann R, Dubilier N. Dual symbiosis in a Bathymodiolus sp. mussel from a methane seep on the Gabon continental margin (Southeast Atlantic): 16S rRNA phylogeny and distribution of the symbionts in gills. 2005. Appl. Environ. Microbiol. 71(4):1694-1700.
  161. Duperron S, Sibuet M, MacGregor BJ, Kuypers MMM, Fisher CR, Dubilier N. Diversity, relative abundance and metabolic potential of bacterial endosymbionts in three Bathymodiolus mussel species from cold seeps in the Gulf of Mexico. 2007. Environ. Microbiol. 9(6):1423–1438.
  162. Durbin AM, Teske A. Archaea in organic-lean and organic-rich marine subsurface sediments: an environmental gradient reflected in distinct phylogenetic lineages. 2012. Front. Microbiol. 3:168.
  163. Ekman S, Blaalid R. The devil in the details: interactions between the branch-length prior and likelihood model affect node support and branch lengths in the phylogeny of the Psoraceae. 2011. Syst. Biol. 60:541-561.
  164. El Alaoui W. Estimation des longueurs de branche et artefact sur la datation moleculaire. 2009. Dissertation, Universite de Montreal.
  165. Elkins JG, Podar M, Graham DE, Makarova KS, Wolf Y, Randau L, Hedlund BP, Brochier-Armanet C, Kunin V, Anderson I, Lapidus A, Goltsman E, Barry K, Koonin EV, Hugenholtz P, Kyrpides N, Wanner G, Richardson P, Keller M, Stetter KO. A korarchaeal genome reveals insights into the evolution of the Archaea. 2008. Proc. Natl. Acad. Sci. USA 105(23):8102-8107.
  166. Eme L, Reigstad LJ, Spang A, Lanzen A, Weinmaier T, Rattei T, ... Brochier-Armanet C. Metagenomics of Kamchatkan hot spring filaments reveal two new major (hyper) thermophilic lineages related to Thaumarchaeota. 2013. Res. Microbiology 0:???-???.
  167. Eme L, Trilles A, Moreira D, Brochier-Armanet C. The phylogenomic analysis of the anaphase promoting complex and its targets points to complex and modern-like control of the cell cycle in the last common ancestor of eukaryotes. 2011. BMC Evol. Biol. 11(1):265.
  168. Emerson D, Rentz JA, Lilburn TG, Davis RE, Aldrich H, Chan C, Moyer CL. A novel lineage of proteobacteria involved in formation of marine Fe-oxidizing microbial mat communities. 2007. PLoS ONE 2(8):e667.
  169. Escalante P, Marquez-Valdelamar L, de la Torre P, Laclette JP, Klicka J. Evolutionary history of a prominent North American warbler clade: The Oporornis–Geothlypis complex. 2009. Mol. Phylogenet. Evol. 53(3):668-678.
  170. Eschholz TW. Genetic diversity and relationships of Swiss Flint maize (Zea mays L. ssp. mays) landraces. 2008. Dissertation, ETH Zurich.
  171. Eto K, Matsui M, Sugahara T. Discordance between mitochondrial DNA genealogy and nuclear DNA genetic structure in the two morphotypes of Rana tagoi tagoi (Amphibia: Anura: Ranidae) in the Kinki region, Japan. 2013. Zoological Science 30(7):553-558.
  172. Evans KM, Chepurnov VA, Sluiman HJ, Thomas SJ, Spears BM, Mann DG. Highly differentiated populations of the freshwater diatom Sellaphora capitata suggest limited dispersal and opportunities for allopatric speciation. 2009. Protist 0(0):???-???.
  173. Evans KM, Wortley AH, Simpson GE, Chepurnov VA, Mann DG. A molecular systematic approach to explore diversity within the Sellaphora pupula species complex (Bacillariophyta). 2008. J. Phycol. 44(1):215–231.
  174. Fahrein K, Masta SE, Podsiadlowski L. The first complete mitochondrial genome sequences of Amblypygi (Chelicerata: Arachnida) reveal conservation of the ancestral arthropod gene order. 2009. Genome 52(5):456-466.
  175. Fahrein K, Talarico G, Braband A, Podsiadlowski L. The complete mitochondrial genome of Pseudocellus pearsei (Chelicerata: Ricinulei) and a comparison of mitochondrial gene rearrangements in Arachnida. 2007. BMC Genomics 8(1):386.
  176. Farias IP, Hrbek T. Patterns of diversification in the discus fishes (Symphysodon spp. Cichlidae) of the Amazon basin. 2008. Mol. Phylogenet. Evol. 49(1):32-43.
  177. Farias IP, Torrico JP, Garcia-Davila C, Santos MD, Hrbek T, Renno JF. Are rapids a barrier for floodplain fishes of the Amazon basin? A demographic study of the keystone floodplain species Colossoma macropomum (Teleostei: Characiformes). 2010. Mol. Phylogenet. Evol. 56(3):1129-1135.
  178. Fedyna A, Drayna D, Kang C. Characterization of a mutation commonly associated with persistent stuttering: evidence for a founder mutation. 2011. J. Human Genetics 56:80-82.
  179. Fernandes CA. Colonization time of Arabia by the White-tailed Mongoose Ichneumia albicauda as inferred from mitochondrial DNA sequences. 2011. Biodiversity Conservation in the Arabian Peninsula Zoology in the Middle East, Supplementum 3, 2011: 111–124.
  180. Fernandez-Garcia A, Perez-Alvarez L, Cuevas MT, Delgado E, Munoz-Nieto M, Cilla G, Iribarren JA, Pinilla M, Ocampo A, Miralles C, Perez-Castro S, Gonzalez-Galeano M, de Castro RO, Trigo M, Garcia V, Sanchez AM, Thomson MM. Identification of a new HIV Type 1 circulating BF intersubtype recombinant form (CRF47_BF) in Spain. 2010. AIDS Research and Human Retroviruses 26(7):827-832.
  181. Ferraresso S, Kuhl H, Milan M, Ritchie DW, Secombes CJ, Reinhardt R, Bargelloni L. Identification and characterisation of a novel immune-type receptor (NITR) gene cluster in the European sea bass, Dicentrarchus labrax, reveals recurrent gene expansion and diversification by positive selection. 2009. Immunogenetics 61(11-12):773-788.
  182. Fiore-Donno AM, Haskins E, Pawlowski J, Cavalier-Smith T. Semimorula liquescens is a modified echinostelid myxomycete (Mycetozoa). 2009. Mycologia 101(6):773-776.
  183. Fiore-Donno AM, Kamono A, Chao EE, Fukui M, Cavalier-Smith T. Invalidation of Hyperamoeba by transferring its species to other genera of Myxogastria. 2010. J. Eukaryotic Microbiology 57(2):189-196.
  184. Fiore-Donno AM, Nikolaev SI, c, Nelson M, Pawlowski J, Cavalier-Smith T, Baldauf SL. Deep phylogeny and evolution of slime moulds (Mycetozoa). 2010. Protist 161(1):55-70.
  185. Fleck G, Brenk M, Misof B. Larval and molecular characters help to solve phylogenetic puzzles in the highly diverse dragonfly family Libellulidae (Insecta: Odonata: Anisoptera): The Tetrathemistinae are a polyphyletic group. 2008. Organisms Diversity and Evolution 8(1):1-16.
  186. Fontaneto D, Boschetti C, Ricci C. Cryptic diversification in ancient asexuals: evidence from the bdelloid rotifer Philodina flaviceps. 2007. J. Evol. Biol. 21(2):580–587.
  187. Fregin S, Haase M, Olsson U, Alstrom P. Multi-locus phylogeny of the family Acrocephalidae (Aves: Passeriformes) - the traditional taxonomy overthrown. 2009. Mol. Phylogenet. Evol. 52(3):866-878.
  188. Fregin S, Haase M, Olsson U, Alstrom P. Pitfalls in comparisons of genetic distances: a case study of the avian family Acrocephalidae. 2012. Mol. Phylogenet. Evol. 62(1):319-328.
  189. Garwicz M, Christensson M, Psouni E. A unifying model for timing of walking onset in humans and other mammals. 2009. Proc. Natl. Acad. Sci. USA 106(51):21889-21893.
  190. Gazi M, Sultana T, Min GS, Park YC, Garcia-Varela M, Nadler SA, Park JK. The complete mitochondrial genome sequence of Oncicola luehei (Acanthocephala: Archiacanthocephala) and its phylogenetic position within Syndermata. 2012. Parasitology International 61(2):307-316.
  191. Gelang M, Cibois A, Pasquet E, Olsson U, Alstrom P, Ericson PGP. Phylogeny of babblers (Aves, Passeriformes): major lineages, family limits and classification. 2009. Zoologica Scripta 38:225-236.
  192. Gentile G, Campanaro A, Carosi M, Sbordoni V, Argano R. Phylogeography of Helleria brevicornis Ebner 1868 (Crustacea, Oniscidea): old and recent differentiations of an ancient lineage. 2010. Mol. Phylogenet. Evol. 54(2):640-646.
  193. Gentile G, Ciambotta M, Tapia W. Illegal wildlife trade in Galapagos: molecular tools help the taxonomic identification of confiscated iguanas and guide their rapid repatriation. 2013. Conservation Genetics Resources 1-6.
  194. Gentile G, Fabiani A, Marquez C, Snell HL, Snell HM, Tapia W, Sbordoni V. An overlooked pink species of land iguana in the Galapagos. 2009. Proc. Natl. Acad. Sci. USA 106(2):507-511.
  195. Gerard E, Moreira D, Philippot P, Van Kranendonk MJ, Lopez-Garcia P. Modern subsurface bacteria in pristine 2.7 Ga-Old fossil stromatolite drillcore samples from the Fortescue Group, Western Australia. 2009. PLoS ONE 4(4):e5298.
  196. Gering EJ, Opazo JC, Storz JF. Molecular evolution of cytochrome b in high- and low-altitude deer mice (genus Peromyscus). 2008. Heredity 102(3):226-235.
  197. Ghai R, Martin-Cuadrado AB, Molto AG, Heredia IG, Cabrera R, Martin J, Verdu M, Deschamps P, Moreira D, Lopez-Garcia P, Mira A, Rodriguez-Valera F. Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing. 2010. ISME J. 4:1154-1166.
  198. Giraldez T, Rojas P, Jou J, Flores C, de la Rosa DA. The epithelial sodium channel d-subunit: new notes for an old song. 2012. Am. J. Physiology - Renal Physiology 303(3):F328-F338.
  199. Glaberman S, Caccone A. Species-specific evolution of class I MHC genes in iguanas (Order: Squamata; Subfamily: Iguaninae). 2008. Immunogenetics 60(7):371-382.
  200. Glaberman S, Du Pasquier L, Caccone A. Characterization of a nonclassical class I MHC gene in a reptile, the Galapagos marine iguana (Amblyrhynchus cristatus). 2008. PLoS ONE 3(8):e2859.
  201. Gladieux P, Caffier V, Devaux M, Le Cam B. Host-specific differentiation among populations of Venturia inaequalis causing scab on apple, pyracantha and loquat. 2010. Fungal. Genet. Biol. 47(6):511-521.
  202. Gladyshev EA, Arkhipova IR. Telomere-associated endonuclease-deficient Penelope-like retroelements in diverse eukaryotes. 2007. Proc. Natl. Acad. Sci. USA 104(22):9352-9357.
  203. Glamoclija M, Garrel L, Berthon J, Lopez-Garcia P. Biosignatures and bacterial diversity in hydrothermal deposits of Solfatara Crater, Italy. 2004. Geomicrobiology Journal 21(8):529-541.
  204. Glaubrecht M, Feher Z, von Rintelen T. Brooding in Corbicula madagascariensis (Bivalvia, Corbiculidae) and the repeated evolution of viviparity in corbiculids. 2006. Zoologica Scripta 35(6):641–654.
  205. Gleixner E, Herlyn H, Zimmerling S, Burmester T, Hankeln T. Testes-specific hemoglobins in Drosophila evolved by a combination of sub- and neofunctionalization after gene duplication. 2012. BMC Evolutionary Biology 12(1):34.
  206. Goker M, Voglmayr H, Riethmuller A, Oberwinkler F. How do obligate parasites evolve? A multi-gene phylogenetic analysis of downy mildews. 2007. Fungal Genetics and Biology 44(2):105-122.
  207. Gomaa F, Todorov M, Heger TJ, Mitchell EAD, Lara E. SSU rRNA phylogeny of Arcellinida (Amoebozoa) reveals that the largest arcellinid genus, Difflugia Leclerc 1815, is not monophyletic. 2012. Protist 163(3):389-399.
  208. Gomez F, Lopez-Garcia P, Moreira D. Molecular phylogeny of the ocelloid-bearing dinoflagellates Erythropsidinium and Warnowia (Warnowiaceae, Dinophyceae). 2009. J. Eukaryot. Microbiol. 56(5):440-445.
  209. Gomez F, Lopez-Garcia P, Moreira D. Molecular phylogeny of dinophysoid dinoflagellates: the systematic position of Oxyphysis oxytoxoides and the Dinophysis hastata group (Dinophysales, Dinophyceae). 2011. Journal of Phycology 47(2):393-406.
  210. Gomez F, Lopez-Garcia P, Nowaczyk A, Moreira D. The crustacean parasites Ellobiopsis Caullery, 1910 and Thalassomyces Niezabitowski, 1913 form a monophyletic divergent clade within the Alveolata. 2009. Syst. Parasitol. 74(1):65-74.
  211. Gomez F, Moreira D, Lopez-Garcia P. Neoceratium gen. nov., a new genus for all marine species currently assigned to Ceratium (Dinophyceae). 2010. Protist 161(1):35-54.
  212. Gomez F, Moreira D, Benzerara K, Lopez-Garcia P. Solenicola setigera is the first characterized member of the abundant and cosmopolitan uncultured marine stramenopile group MAST-3. 2011. Environmental Microbiology 13(1):193-202.
  213. Gomez F, Moreira D, Lopez-Garcia P. Molecular phylogeny of the dinoflagellates Podolampas and Blepharocysta (Peridiniales, Dinophyceae). 2010. Phycologia 49(3):212-220.
  214. Gomez F, Moreira D, Lopez-Garcia P. Molecular phylogeny of noctilucoid dinoflagellates (Noctilucales, Dinophyceae). 2010. Protist 161(3):466-478.
  215. Goto R, Okamoto T, Ishikawa H, Hamamura Y, Kato M. Molecular phylogeny of echiuran worms (Phylum: Annelida) reveals evolutionary pattern of feeding mode and sexual dimorphism. 2013. PloS One 8(2):e56809.
  216. Grapputo A, Kumpulainen T, Mappes J. Phylogeny and evolution of parthenogenesis in Finnish bagworm moth species (Lepidoptera: Psychidae: Naryciinae) based on mtDNA-markers. 2005. Ann. Zool. Fennici 42(2):141-160.
  217. Gratton P, Konopinski MK, Sbordoni V. Pleistocene evolutionary history of the Clouded Apollo (Parnassius mnemosyne): genetic signatures of climate cycles and a 'time-dependent' mitochondrial substitution rate. 2008. Molecular Ecology 17(19):4248-4262.
  218. Grauvogel C. Molekulare, zellbiologische und phylogenetische Analysen von Genen des eukaryotischen Primarstoffwechsels - Evolution der Glucose-6-phosphat Isomerase und des cytosolischen sowie plastidaren Stoffwechselwegs zur Isoprenoid-Biosynthese. 2007. Dissertation, Technische Universitat Carolo-Wilhelmina zu Braunschweig.
  219. Grauvogel C, Brinkmann H, Petersen J. Evolution of the glucose-6-phosphate isomerase: the plasticity of primary metabolism in photosynthetic eukaryotes. 2007. Mol. Biol. Evol. 24(8):1611-1621.
  220. Grauvogel C, Petersen J. Isoprenoid biosynthesis authenticates the classification of the green alga Mesostigma viride as an ancient streptophyte. 2007. Gene 396(1):125-133.
  221. Grauvogel C, Reece KS, Brinkmann H, Petersen J. Plastid isoprenoid metabolism in the oyster parasite Perkinsus marinus connects dinoflagellates and malaria pathogens - new impetus for studying alveolates. 2007. J. Mol. Evol. 65(6):725-729.
  222. Grazziotin FG. Estudo filogeografico de Bothrops jararaca (WIED, 1824) baseado no DNA mitocondrial (squamata: serpentes: viperidae). 2004. Dissertation, Porto Alegre, Brazil.
  223. Groussin M, Gouy M. Adaptation to environmental temperature is a major determinant of molecular evolutionary rates in Archaea. 2011. Mol. Biol. Evol. 28:2661-2674.
  224. Guha S, Goyal SP, Kashyap VK. Molecular phylogeny of musk deer: A genomic view with mitochondrial 16S rRNA and cytochrome b gene. 2007. Mol. Phylogenet. Evol. 42(3):585-597.
  225. Guilgur LG, Orti G, Strobl-Mazzulla PH, Fernandino JI, Miranda LA, Somoza GM. Characterization of the cDNAs encoding three GnRH forms in the pejerrey fish Odontesthes bonariensis (Atheriniformes) and the evolution of GnRH precursors. 2007. J. Mol. Evol. 64(6):614-627.
  226. Gunther R, Stelbrink B, von Rintelen T. Oninia senglaubi, another new genus and species of frog (Amphibia, Anura, Microhylidae) from New Guinea. 2010. Zoosystematics and Evolution 86(2):245-256.
  227. Gutsche A, Kohler F. Phylogeography and hybridization in Ctenosaura species (Sauria, Iguanidae) from Caribbean Honduras: insights from mitochondrial and nuclear DNA. 2008. Zoosystematics and Evolution 84(2):245-253.
  228. Haen KM, Lang BF, Pomponi SA, Lavrov DV. Glass sponges and bilaterian animals share derived mitochondrial genomic features: a common ancestry or parallel evolution? 2007. Mol. Biol. Evol. 24(7):1518-1527.
  229. Hahn MW. Isolation of strains belonging to the cosmopolitan Polynucleobacter necessarius cluster from freshwater habitats located in three climatic zones. 2003. Appl. Environ. Microbiol. 69(9):5248-5254.
  230. Hallstrom BM, Janke A. Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced their earliest radiations. 2008. BMC Evol. Biol. 8:162.
  231. Hallstrom BM, Janke A. Gnathostome phylogenomics utilizing lungfish EST sequences. 2009. Mol. Biol. Evol. 26(2):463-471.
  232. Hallstrom BM, Janke A. Mammalian evolution may not be strictly bifurcating. 2010. Mol. Biol. Evol. 27(12):2804-2816.
  233. Hallstrom BM, Kullberg M, Nilsson MA, Janke A. Phylogenomic data analyses provide evidence that Xenarthra and Afrotheria are sister groups. 2007. Mol. Biol. Evol. 24(9):2059-2068.
  234. Hamidy A, Matsui M, Shimada T, Nishikawa K, Yambun P, Sudin A, Kusrini MD, Kurniati H. Morphological and genetic discordance in two species of Bornean Leptobrachium (Amphibia, Anura, Megophryidae). 2011. Mol. Phylogenet. Evol. 61(3):904-913.
  235. Hanfling B, Dumpelmann C, Bogutskaya NG, Brandl R, Brandle M. Shallow phylogeographic structuring of Vimba vimba across Europe suggests two distinct refugia during the last glaciation. 2010. J. Fish Biology 75(9):2269-2286.
  236. Hania WB, Ghodbane R, Postec A, Brochier-Armanet C, Hamdi M, Fardeau ML, Ollivier B. Cultivation of the first mesophilic representative ("mesotoga") within the order Thermotogales. 2011. Systematic and Applied Microbiology 34(8):581-585.
  237. Hartzell PL, Nghiem JV, Richio KJ, Shain DH. Distribution and phylogeny of glacier ice worms (Mesenchytraeus solifugus and Mesenchytraeus solifugus rainierensis). 2005. Can. J. Zool. 83(9):1206-1213.
  238. Hashiguchi Y, Nishida M. Screening the V2R-type putative odorant receptor gene repertoire in bitterling Tanakia lanceolata. 2008. Gene 0(0):???-???.
  239. Hausdorf B, Helmkampf M, Meyer A, Witek A, Herlyn H, Bruchhaus I, Hankeln T, Struck TH, Lieb B. Spiralian phylogenomics supports the resurrection of Bryozoa comprising Ectoprocta and Entoprocta. 2007. Mol. Biol. Evol. 24(12):2723-2729.
  240. Hausdorf B, Helmkampf M, Nesnidal MP, Bruchhaus I. Phylogenetic relationships within the lophophorate lineages (Ectoprocta, Brachiopoda and Phoronida). 2010. Mol. Phylogenet. Evol. 55(3):1121-1127.
  241. Hausdorf B, Wilkens H, Strecker U. Population genetic patterns revealed by microsatellite data challenge the mitochondrial DNA based taxonomy of Astyanax in Mexico (Characidae, Teleostei). 2011. Mol. Phylogenet. Evol. 60(1):89-97.
  242. Hayashi M, Sota T. Identification of elmid larvae (Coleoptera: Elmidae) from Sanin District of Honshu, Japan, based on mitochondrial DNA sequences. 2010. Entomological Science 13(4):417-424.
  243. He L, Dai B, Zeng B, Zhang X, Chen B, Yue B, Li J. The complete mitochondrial genome of the Sichuan Hill Partridge (Arborophila rufipectus) and a phylogenetic analysis with related species. 2009. Gene 435(1):23-28.
  244. Heger TJ, Booth RK, Sullivan ME, Wilkinson DM, Warner BG, Asada T, Mazei Y, Meisterfeld R, Mitchell EAD. Rediscovery of Nebela ansata (Amoebozoa: Arcellinida) in eastern North America: biogeographical implications. 2011. J. Biogeography 38(10):1897-1906.
  245. Heger TJ, Pawlowski J, Lara E, Leander BS, Todorov M, Golemansky V, Mitchell EAD. Comparing potential COI and SSU rDNA barcodes for assessing the diversity and phylogenetic relationships of cyphoderiid testate amoebae (Rhizaria: Euglyphida). 2011. Protist 162(1):131-141.
  246. Heinrich-Salmeron A, Cordi A, Brochier-Armanet C, Halter D, Pagnout C, Abbaszadeh-fard E, Montaut D, Seby F, Bertin PN, Bauda P, Arsene-Ploetze F. Unsuspected diversity of arsenite-oxidizing bacteria as revealed by widespread distribution of the aoxB gene in prokaryotes. 2011. Appl. Environ. Microbiol. 77(13):4685-4692.
  247. Held DM, Kissel JD, Thacker SJ, Michalowski D, Saran D, Ji J, Hardy RW, Rossi JJ, Burke DH. Cross-clade inhibition of recombinant HIV-1, HIV-2 and SIVcpz reverse transcriptases by RNA pseudoknot aptamers. 2007. J. Virol. 81(10):5375-5384.
  248. Helmkampf M, Bruchhaus I, Hausdorf B. Multigene analysis of lophophorate and chaetognath phylogenetic relationships. 2008. Mol. Phylogenet. Evol. 46(1):206-214.
  249. Helmkampf M, Bruchhaus I, Hausdorf B. Phylogenomic analyses of lophophorates (brachiopods, phoronids and bryozoans) confirm the Lophotrochozoa concept. 2008. Proc. Biol. Sci. 275(1645):1927-1933.
  250. Herniou EA, Jehle JA. Baculovirus phylogeny and evolution. 2007. Current Drug Targets 8(10):1043-1050.
  251. Hiendleder S, Lewalski H, Janke A. Complete mitochondrial genomes of Bos taurus and Bos indicus provide new insights into intra-species variation, taxonomy and domestication. 2008. Cytogenet. Genome Res. 120:150-156.
  252. Hill M, Hill A, Lopez N, Harriott O. Sponge-specific bacterial symbionts in the Caribbean sponge, Chondrilla nucula (Demospongiae, Chondrosida). 2006. Mar. Biol. 148(6):1221-1230.
  253. Himmelreich S, Kallersjo M, Eldenas P, Oberprieler C. Phylogeny of southern hemisphere Compositae-Anthemideae based on nrDNA ITS and cpDNA ndh F sequence information. 2008. Plant Systematics and Evolution 272(1-4):131-153.
  254. Hirata D, Mano T, Abramov AV, Baryshnikov GF, Kosintsev PA, Vorobiev AA, Raichev EG, Tsunoda H, Kaneko Y, Murata K, Fukui D, Masuda R. Molecular phylogeography of the brown bear (Ursus arctos) in Northeastern Asia based on analyses of complete mitochondrial DNA Sequences. 2013. Mol. Biol. Evol. 30:1644-1652.
  255. Hirose M, Nozawa Y, Hirose E. Genetic isolation among Morphotypes in the photosymbiotic Didemnid Didemnum molle (Ascidiacea, Tunicata) from the Ryukyus and Taiwan. 2010. Zoological Science 27(12):959-964.
  256. Hirose E, Oka AT, Hirose M. Two new species of photosymbiotic ascidians of the genus Diplosoma from the Ryukyu Archipelago, with partial sequences of the COI Gene. 2009. Zoological Science 26(5):362-368.
  257. Hirose M, Tochikubo T, Hirose E. Taxonomic significance of tunic spicules in photosymbiotic ascidians: a quantitative and molecular evaluation. 2010. J. Marine Biological Association UK 90:1065-1071.
  258. Hirose M, Yokobori S, Hirose E. Potential speciation of morphotypes in the photosymbiotic ascidian Didemnum molle in the Ryukyu Archipelago, Japan. 2009. Coral Reefs 28(1):119-126.
  259. Hoffmann FG, He X, West JT, Lemey P, Kankasa C, Wood C. Genetic variation in mother-child acute seroconverter pairs from Zambia. 2008. AIDS 22(7):817-824.
  260. Hoffmann FG, Hoofer SR, Baker RJ. Molecular dating of the diversification of Phyllostominae bats based on nuclear and mitochondrial DNA sequences. 2008. Mol. Phylogenet. Evol. 49(2):653-658.
  261. Hoffmann FG, Opazo JC. Evolution of the relaxin/insulin-like gene family in placental mammals: implications for its early evolution. 2011. J. Mol. Evol. 72(1):72-79.
  262. Hoffmann FG, Opazo JC, Storz JF. Rapid rates of lineage-specific gene duplication and deletion in the {alpha}-globin gene family. 2008. Mol. Biol. Evol. 25(3):591-602.
  263. Hoffmann FG, Opazo JC, Storz JF. New genes originated via multiple recombinational pathways in the {beta}-Globin gene family of rodents. 2008. Mol. Biol. Evol. 25(12):2589-2600.
  264. Hoffmann FG, Opazo JC, Storz JF. Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates. 2010. Proc. Natl. Acad. Sci. USA 107(32):14274-14279.
  265. Hoffmann FG, Opazo JC, Storz JF. Differential loss and retention of cytoglobin, myoglobin, and globin-E during the radiation of vertebrates. 2011. Genome Biol. Evol. 3:588-600.
  266. Hoffmann FG, Opazo JC, Storz JF. Whole-genome duplications spurred the functional diversification of the globin gene superfamily in vertebrates. 2012. Mol. Biol. Evol. 29:303-312.
  267. Hoffmann FG, Storz JF. The alpha-D globin gene originated via duplication of an embryonic alpha-like globin gene in the ancestor of tetrapod vertebrates. 2007. Mol. Biol. Evol. 24(9):1982-1990.
  268. Hoffmann FG, Storz JF, Gorr TA, Opazo JC. Lineage-specific patterns of functional diversification in the alpha- and beta-globin gene families of tetrapod vertebrates. 2010. Mol. Biol. Evol. 27(5):1126-38.
  269. Holz CL, Albina E, Minet C, Lancelot R, Kwiatek O, Libeau G, Servan de Almeida R. RNA interference against animal viruses: how morbilliviruses generate extended diversity to escape siRNA control. 2012. J. Virol. 86:786-795.
  270. Homolka S, Projahn M, Feuerriegel S, Ubben T, Diel R, Nubel U, Niemann S. High resolution discrimination of clinical Mycobacterium tuberculosis complex strains based on single nucleotide polymorphisms. 2012. PloS One 7(7):e39855.
  271. Hooper EJ, Duckett JG, Cuming AC, Kunin WE, Pressel S. Ephemerella readeri Mull. Hal. (Physcomitrella readeri (Mull. Hal.) I.G. Stone & G.A.M. Scott, Funariidae, Bryophyta): a genus and species new to Europe. 2010. J. Bryology 32(4):256-264.
  272. Hopitzan AA, Baines AJ, Kordeli E. Molecular evolution of ankyrin: gain of function in vertebrates by acquisition of an obscurin/titin-binding-related domain. 2006. Mol. Biol. Evol. 23(1):46-55.
  273. Hoshizaki S, Washimori R, Kubota SI, Frolov AN, Kageyama D, Gomboc S, Ohno S, Tatsuki S, Ishikawa Y. Limited variation in mitochondrial DNA of maize-associated Ostrinia nubilalis (Lepidoptera: Crambidae) in Russia, Turkey and Slovenia. 2008. Eur. J. Entomol. 105(4):545–552.
  274. Hoso M, Kameda Y, Wu S, Asami T, Kato M, Hori M. A speciation gene for left–right reversal in snails results in anti-predator adaptation. 2010. Nature Communications 1:133.
  275. Hou S, Makarova KS, Saw JHW, Senin P, Ly BV, Zhou Z, Ren Y, Wang J, Galperin MY, Omelchenko MV, Wolf YI, Yutin N, Koonin EV, Stott MB, Mountain BW, Crowe MA, Smirnova AV, Dunfield PF, Feng L, Wang L, Alam M. Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia. 2008. Biol. Direct 3:26.
  276. Houston DD, Evans RP, Shiozawa DK. Evaluating the genetic status of a Great Basin endemic minnow: the relict dace (Relictus solitarius). 2012. Conservation Genetics 13(3):727-742.
  277. Houston DD, Ogden TH, Whiting MF, Shiozawa DK. Polyphyly of the pikeminnows (Teleostei: Cyprinidae) inferred using mitochondrial DNA sequences. 2010. Trans. Am. Fish. Soc. 139(1):303-315.
  278. Huang J, Gogarten JP. Concerted gene recruitment in early plant evolution. 2008. Genome Biol. 9(7):R109.
  279. Hughes RN, Gomez A, Wright PJ, Moyano HI, Cancino JM, Carvalho GR, Lunt DH. Molecular phylogeny supports division of the 'cosmopolitan' taxon Celleporella (Bryozoa; Cheilostomata) into four major clades. 2008. Mol. Phylogenet. Evol. 46(1):369-374.
  280. Ikeda H, Nishikawa M, Sota T. Loss of flight promotes beetle diversification. 2012. Nature Communications 3:648.
  281. Ikinci N. Molecular phylogeny and divergence times estimates of Lilium section Liriotypus (Liliaceae) based on plastid and nuclear ribosomal ITS DNA sequence data. 2001. Turk. J. Bot. 35:319-330.
  282. Imada Y, Kawakita A, Kato M. Allopatric distribution and diversification without niche shift in a bryophyte-feeding basal moth lineage (Lepidoptera: Micropterigidae). 2011. Proc. R. Soc. B. 278:3026-3033.
  283. Inoue K, Hayes DM, Harris JL, Christian AD. Phylogenetic and morphometric analyses reveal ecophenotypic plasticity in freshwater mussels Obovaria jacksoniana and Villosa arkansasensis (Bivalvia: Unionidae). 2013. Ecology and Evolution 0:???-???.
  284. Irestedt M, Gelang M, Sangster G, Olson U, Ericson PG, Alstrom P. Neumann’s Warbler Hemitesia neumanni (Sylvioidea): the sole African member of a Palaeotropic Miocene avifauna. 2011. Ibis 153(1):78-86.
  285. Ishitani Y, Ujiie Y, de Vargas C, Not F, Takahashi K. Two distinct lineages in the radiolarian order Spumellaria having different ecological preferences. 2012. Deep Sea Research Part II: Topical Studies in Oceanography 61–64:172–178.
  286. Iwanowicz LR, Iwanowicz DD, Pote LM, Blazer VS, Schill WB. Morphology and 18S rDNA of Henneguya gurlei (Myxosporea) from Ameiurus nebulosus (Siluriformes) in North Carolina. 2008. J. Parasitol. 94(1):46–57.
  287. Jang KH, Hwang UW. Complete mitochondrial genome of Bugula neritina (Bryozoa, Gymnolaemata, Cheilostomata): phylogenetic position of Bryozoa and phylogeny of lophophorates within the Lophotrochozoa. 2009. BMC Genomics 10:167.
  288. Janke A. The importance of data sampling and analysis in resolving crocodylian relationships. 2008. Mol. Phylogenet. Evol. 49(1):407-408.
  289. Jasinski S, Vialette-Guiraud AC, Scutt CP. The evolutionary-developmental analysis of plant microRNAs. 2010. Philos. Trans. R. Soc. Lond. B. Biol. Sci. 365(1539):469-476.
  290. Jeffroy O, Brinkmann H, Delsuc F, Philippe H. Phylogenomics: the beginning of incongruence? 2006. Trends Genet. 22(4):225-231.
  291. Jensen D, Svenson GJ, Song H, Whiting MF. Phylogeny and evolution of male genitalia within the praying mantis genus Tenodera (Mantodea : Mantidae). 2009. Invertebrate Systematics 23(5):409-421.
  292. Jezkova T, Leal M, Rodriguez-Robles JA. Living together but remaining apart: comparative phylogeography of Anolis poncensis and A. cooki, two lizards endemic to the aridlands of Puerto Rico. 2009. Biological Journal of the Linnean Society 96(3):617-634.
  293. Jorger KM, Stoger I, Kano Y, Fukuda H, Knebelsberger T, et al.. On the origin of Acochlidia and other enigmatic euthyneuran gastropods, with implications for the systematics of Heterobranchia. 2010. BMC Evolutionary Biology 10(1):323.
  294. Jorgensen SJ, Reeb CA, Chapple TK, Anderson S, Perle C, Van Sommeran SR, Fritz-Cope C, Brown AC, Klimley AP, Block BA. Philopatry and migration of Pacific white sharks. 2010. Proc. Biol. Sci. 277(1682):679-688.
  295. Jourdie V, Virla E, Murillo H, Bento JM, Turlings TC, Alvarez N. Phylogeography of Chelonus insularis (Hymenoptera: Braconidae) and Campoletis sonorensis (Hymenoptera: Ichneumonidae), two primary neotropical parasitoids of the fall armyworm (Lepidoptera: Noctuidae). 2010. Annals of the Entomological Society of America 103(5):742-749.
  296. Kameda Y, Kato M. Terrestrial invasion of pomatiopsid gastropods in the heavy-snow region of the Japanese Archipelago. 2011. BMC Evol. Biol. 11(1):118.
  297. Kan XZ, Li XF, Lei ZP, Chen L, Gao H, Yang ZY, Yang JK, Guo ZC, Yu L, Zhang LQ, Qian CJ. Estimation of divergence times for major lineages of galliform birds: evidence from complete mitochondrial genome sequences. 2010. African Journal of Biotechnology 9(21):3073-3078.
  298. Kanzaki N, Aikawa T, Giblin-Davis R. Bursaphelenchus tokyoensis n. sp. (Nematoda: Parasitaphelenchinae) isolated from dead wood of the Japanese red pine, Pinus densiflora Sieb. + Zucc., in Japan. 2009. Nematology 11(2):171-180.
  299. Kanzaki N, Maehara N, Aikawa T, Togashi K. First report of parthenogenesis in the genus Bursaphelenchus Fuchs, 1937: a description of Bursaphelenchus okinawaensis sp. nov. isolated from Monochamus maruokai (Coleoptera: Cerambycidae). 2008. Zoological Science 25(8):861–873.
  300. Kanzaki N, Maehara N, Masuya H. Bursaphelenchus clavicauda n. sp. (Nematoda: Parasitaphelenchidae) isolated from Cryphalus sp. emerged from a dead Castanopsis cuspidata (Thunb.) Schottky var. sieboldii (Makino) Nakai in Ishigaki Island, Okinawa, Japan. 2007. Nematology 9(6):759-769.
  301. Kapralov MV, Kubien DS, Andersson I, Filatov DA. Changes in Rubisco kinetics during the evolution of C4 photosynthesis in Flaveria (Asteraceae) are associated with positive selection on genes encoding the enzyme. 2011. Mol. Biol. Evol. 28(4):1491-1503.
  302. Kapralov MV, Votintseva AA, Filatov DA. Molecular adaptation during a rapid adaptive radiation. 2013. Mol. Biol. Evol. 30:1051-1059.
  303. Kawahara R, Nishida M. Extensive lineage-specific gene duplication and evolution of the spiggin multi-gene family in stickleback. 2007. BMC Evol. Biol. 7:209.
  304. Kawakita A, Okamoto T, Goto R, Kato M. Mutualism favours higher host specificity than does antagonism in plant-herbivore interaction. 2010. Proc. Biol. Sci. 277(1695):2765-2774.
  305. Kayal E, Lavrov DV. The mitochondrial genome of Hydra oligactis (Cnidaria, Hydrozoa) sheds new light on animal mtDNA evolution and cnidarian phylogeny. 2008. Gene 410(1):177-186.
  306. Kehrer D, Ahmed H, Brinkmann H, Siebers B. Glycerate kinase of the hyperthermophilic archaeon Thermoproteus tenax: new insights into the phylogenetic distribution and physiological role of members of the three different glycerate kinase classes. 2007. BMC Genomics 8(1):301.
  307. Keith P, Lord C, Lorion J, Watanabe S, Tsukamoto K, Couloux A, Dettai A. Phylogeny and biogeography of Sicydiinae (Teleostei: Gobiidae) inferred from mitochondrial and nuclear genes. 2011. Marine Biology 158(2):311-326.
  308. Kellner A, Ritz CM, Schlittenhardt P, Hellwig FH. Genetic differentiation in the genus Lithops L. (Ruschioideae, Aizoaceae) reveals a high level of convergent evolution and reflects geographic distribution. 2010. Plant Biology 0(0):???-???.
  309. Khan AA, Janke A, Shimokawa T, Zhang H. Phylogenetic analysis of Kindlins suggests subfunctionalization of an ancestral unduplicated Kindlin into three paralogs in vertebrates. 2011. Evolutionary Bioinformatics 2011(7):7-19.
  310. Kilpert F, Held C, Podsiadlowski L. Multiple rearrangements in mitochondrial genomes of Isopoda and phylogenetic implications. 2012. Mol. Phylogenet. Evol. 64(1):106-117.
  311. Kim MJ, Kang AR, Jeong HC, Kim KG, Kim I. Reconstructing intraordinal relationships in Lepidoptera using mitochondrial genome data with the description of two newly sequenced lycaenids, Spindasis takanonis and Protantigius superans (Lepidoptera: Lycaenidae). 2011. Mol. Phylogenet. Evol. 61(2):436-445.
  312. Kiss L, Takamatsu S, Cunnington JH. Molecular identification of Oidium neolycopersici as the causal agent of the recent tomato powdery mildew epidemics in North America. 2005. Plant Disease 89:491–496.
  313. Kissel JD, Held DM, Hardy RW, Burke DH. Single-stranded DNA aptamer RT1t49 inhibits RT polymerase and RNase H functions of HIV type 1, HIV type 2, and SIV(CPZ) RTs. 2007. AIDS Res. Hum. Retroviruses 23(5):699-708.
  314. Klassert TE, Hernandez MA, Campos F, Infante O, Almeida T, Suarez NM, Pestano J, Hernandez M. Mitochondrial DNA points to Lanius meridionalis as a polyphyletic species. 2008. Mol. Phylogenet. Evol. 47(3):1227-1231.
  315. Klicka J, Burns K, Spellman GM. Defining a monophyletic Cardinalini: A molecular perspective. 2007. Mol. Phylogenet. Evol. 45(2007):1014-1032.
  316. Knott KE, Haimi J. High mitochondrial DNA sequence diversity in the parthenogenetic earthworm Dendrobaena octaedra. 2010. Heredity 105:341-347.
  317. Koepfli KP, Deere KA, Slater GJ, Begg C, Begg K, Grassman L, Lucherini M, Veron G, Wayne RK. Multigene phylogeny of the Mustelidae: resolving relationships, tempo and biogeographic history of a mammalian adaptive radiation. 2008. BMC Biology 6:10.
  318. Kohler F. Australocosmica, a new genus of land snails from the Kimberley, Western Australia (Eupulmonata, Camaenidae). 2011. Malacologia 53(2):199-216.
  319. Kohler F, Glaubrecht M. Out of Asia and into India: on the molecular phylogeny and biogeography of the endemic freshwater gastropod Paracrostoma Cossmann, 1900 (Caenogastropoda: Pachychilidae). 2007. Biological Journal of the Linnean Society 91(4):627–651.
  320. Kohler F, Glaubrecht M. Uncovering an overlooked radiation: molecular phylogeny and biogeography of Madagascar's endemic river snails (Caenogastropoda: Pachychilidae: Madagasikara gen. nov.). 2010. Biological Journal of the Linnean Society 99(4):867-894.
  321. Kohler F, Dames C. Phylogeny and systematics of the Pachychilidae of mainland South-East Asia – novel insights from morphology and mitochondrial DNA (Mollusca, Caenogastropoda, Cerithioidea). 2009. Zoological Journal of the Linnean Society 157(4):679–699.
  322. Kohler F, Gunther R. The radiation of microhylid frogs (Amphibia: Anura) on New Guinea: A mitochondrial phylogeny reveals parallel evolution of morphological and life history traits and disproves the current morphology-based classification. 2008. Mol. Phylogenet. Evol. 0(0):???-???.
  323. Kohler F, Schultze KJ, Gunther R, Plotner J. On the genetic diversity in the mitochondrial 12S rRNA gene of Platymantis frogs from Western New Guinea (Anura: Ceratobatrachidae). 2008. J. Zool. Syst. Evol. Res. 46(2):177–185.
  324. Kojima KK, Kanehisa M. Systematic survey for novel types of prokaryotic retroelements based on gene neighborhood and protein architecture. 2008. Mol. Biol. Evol. 25(7):1395-1404.
  325. Kojima KK, Kuma K, Toh H, Fujiwara H. Identification of rDNA-specific non-LTR retrotransposons in Cnidaria. 2006. Mol. Biol. Evol. 23(10):1984-1993.
  326. Kokita T, Nohara K. Phylogeography and historical demography of the anadromous fish Leucopsarion petersii in relation to geological history and oceanography around the Japanese Archipelago. 2011. Molecular Ecology 20:143-164.
  327. Kolisko M, Cepicka I, Hampl V, Leigh J, Roger AJ, Kulda J, Simpson AG, Flegr J. Molecular phylogeny of diplomonads and enteromonads based on SSU rRNA, alpha-tubulin and HSP90 genes: implications for the evolutionary history of the double karyomastigont of diplomonads. 2008. BMC Evol. Biol. 8(1):205.
  328. Kolokotronis SO, Macphee RD, Greenwood AD. Detection of mitochondrial insertions in the nucleus (NuMts) of Pleistocene and modern muskoxen. 2007. BMC Evol. Biol. 7:67.
  329. Kondgen S, Kuhl H, N'Goran PK, Walsh PD, Schenk S, Ernst N, Biek R, Formenty P, Matz-Rensing K, Schweiger B, Junglen S, Ellerbrok H, Nitsche A, Briese T, Lipkin WI, Pauli G, Boesch C, Leendertz FH. Pandemic human viruses cause decline of endangered great apes. 2008. Current Biology 18(4):260-264.
  330. Koonin EV, Wolf YI, Nagasaki K, Dolja VV. The Big Bang of picorna-like virus evolution antedates the radiation of eukaryotic supergroups. 2008. Nat. Rev. Microbiol. 6(12):925-939.
  331. Kouril T, Zaparty M, Marrero J, Brinkmann H, Siebers B. A novel trehalose synthesizing pathway in the hyperthermophilic Crenarchaeon Thermoproteus tenax: the unidirectional TreT pathway. 2008. Archives of Microbiology 190(3):355-369.
  332. Kosiol C, Anisimova M. Selection on the protein-coding genome. 2012. Methods in Molecular Biology 856(2):113-140.
  333. Kruger D, Gargas A. Secondary structure of ITS2 ribosomal RNA provides taxonomic characters for systematic studies - a case in Lycoperdaceae (Basidiomycota). 2008. Mycological Research 112(3):316-330.
  334. Kruger D, Sharma M, Varma A. Assessing the mycorrhizal diversity of soils and identification of fungus fruiting bodies and axenic cultures. Varma A and Kharkwal AC (eds.), Symbiotic Fungi, Soil Biology 18.
  335. Ku SY, Hu YJ. Structural alphabet motif discovery and a structural motif database. 2012. Computers in Biology and Medicine 42(1):93-105.
  336. Kudryavtsev A, Wylezich C, Schlegel M, Walochnik J, Michel R. Ultrastructure, SSU rRNA gene sequences and phylogenetic relationships of Flamella Schaeffer, 1926 (Amoebozoa), with description of three new species. 2009. Protist 160(1):21-40.
  337. Kullberg M, Hallstrom B, Arnason U, Janke A. Expressed sequence tags as a tool for phylogenetic analysis of placental mammal evolution. 2007. PLoS ONE 2(8):e775.
  338. Kullberg M, Hallstrom B, Arnason U, Janke A. Phylogenetic analysis of 1.5 Mbp and platypus EST data refute the Marsupionta hypothesis and unequivocally support Monotremata as sister group to Marsupialia/Placentalia. 2008. Zoologica Scripta 37(2):115–127.
  339. Kullberg M, Nilsson MA, Arnason U, Harley EH, Janke A. Housekeeping genes for phylogenetic analysis of eutherian relationships. 2006. Mol. Biol. Evol. 23(8):1493-1503.
  340. Kumar S, Skjaeveland A, Orr RJ, Enger P, Ruden T, Mevik BH, Burki F, Botnen A, Shalchian-Tabrizi K. AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses. 2009. BMC Bioinformatics 10:357.
  341. Kumazawa Y. Mitochondrial genomes from major lizard families suggest their phylogenetic relationships and ancient radiations. 2007. Gene 388(1-2):19-26.
  342. Kurabayashi A, Matsui M, Belabut DM, Yong HS, Ahmad N, Sudin A, Kuramoto M, Hamidy A, Sumida M. From Antarctica or Asia? New colonization scenario for Australian-New Guinean narrow mouth toads suggested from the findings on a mysterious genus Gastrophrynoides. 2011. BMC Evol. Biol. 11(1):175.
  343. Kurabayashi A, Yoshikawa N, Sato N, Hayashi Y, Oumi S, Fujii T, Sumida M. Complete mitochondrial DNA sequence of the endangered frog Odorrana ishikawae (family Ranidae) and unexpected diversity of mt gene arrangements in ranids. 2010. Mol. Phylogenet. Evol. 56(2):543-553.
  344. Kuramoto M, Satou N, Oumi S, Kurabayashi A, Sumida M. Inter- and intra-island divergence in Odorrana ishikawae (Anura, Ranidae) of the Ryukyu Archipelago of Japan, with description of a new species. 2011. Zootaxa 2767:25-40.
  345. Kurniawan N, Islam MM, Djong TH, Igawa T, Daicus MB, Yong HS, Wanichanon R, Khan MM, Iskandar DT, Nishioka M, Sumida M. Genetic divergence and evolutionary relationship in Fejervarya cancrivora from Indonesia and other Asian countries inferred from allozyme and MtDNA sequence analyses. 2010. Zoolog. Sci. 27(3):222-233.
  346. Lafay B, Burdon JJ. Molecular diversity of rhizobia nodulating the invasive legume Cytisus scoparius in Australia. 2006. J. Appl. Microbiol. 100(6):1228-1238.
  347. Lane CE, Durnford DG. Endosymbiosis and the evolution of plastids. 2010. Molecular Phylogeny of Microorganisms, Oren A, Papke TR.
  348. Lara E, Acosta-Mercado D. A molecular perspective on ciliates as soil bioindicators. 2012. European J. Soil Biology 49:107-111.
  349. Lara E, Belbahri L. SSU rRNA reveals major trends in oomycete evolution 2011. Fungal Diversity 49(1):93-100.
  350. Lara E, Mitchell EA, Moreira D, Lopez Garcia P. Highly diverse and seasonally dynamic protist community in a pristine peat bog. 2011. Protist 162(1):14-32.
  351. Lara E, Moreira D, Lopez-Garcia P. The environmental clade LKM11 and Rozella form the deepest branching clade of fungi. 2010. Protist 161(1):116-121.
  352. Lara E, Moreira D, Vereshchaka A, Lopez-Garcia P. Pan-oceanic distribution of new highly diverse clades of deep-sea diplonemids. 2009. Environ. Microbiol. 11(1):47-55.
  353. Lartillot N, Philippe H. Improvement of molecular phylogenetic inference and the phylogeny of Bilateria. 2008. Philosophical Transactions of the Royal Society B: Biological Sciences 363(1496):1463-1472.
  354. La Scola B, Desnues C, Pagnier I, Robert C, Barrassi L, Fournous G, Merchat M, Suzan-Monti M, Forterre P, Koonin E, Raoult D. The virophage as a unique parasite of the giant mimivirus. 2008. Nature 455(7209):100-104.
  355. Lau SKP, Woo PCY, Lai KKY, Huang Y, Yip CCY, Shek CT, Lee P, Lam CSF, Chan KH, Yuen KY. Complete genome analysis of three novel picornaviruses from diverse bat species. 2011. J. Virol. 85:8819-8828.
  356. Laurin-Lemay S. Phylogeographie comparee d’un systeme multitrophique: les parasitoides du genre Horismenus spp. ont-ils echappe au processus de domestication du haricot au Mexique? 2011. These ou Memoire, Universite de Montreal.
  357. Lauro FM, Chastain RA, Blankenship LE, Yayanos AA, Bartlett DH. The unique 16S rRNA genes of piezophiles reflect both phylogeny and adaptation. 2007. Appl. Environ. Microbiol. 73(3):838-845.
  358. Lavrov DV, Wang X, Kelly M. Reconstructing ordinal relationships in the Demospongiae using mitochondrial genomic data. 2008. Mol. Phylogenet. Evol. 49(1):111-124.
  359. Lecroq B, Gooday AJ, Tsuchiya M, Pawlowski J. A new genus of xenophyophores (Foraminifera) from Japan Trench: morphological description, molecular phylogeny and elemental analysis. 2009. Zoological Journal of the Linnean Society 156(3):455-464.
  360. Lee CC, Sun YJ, Barkham T, Leo YS. Primary drug resistance and transmission analysis of HIV-1 in acute and recent drug-naive seroconverters in Singapore. 2009. HIV Medicine 10(6):370-377.
  361. Lemmon AR, Brown JM, Stanger-Hall K, Lemmon EM. The effect of ambiguous data on phylogenetic estimates obtained by maximum likelihood and Bayesian inference. 2009. Syst. Biol. 58(1):130-145.
  362. Lepage T, Bryant D, Philippe H, Lartillot N. A general comparison of relaxed molecular clock models. 2007. Mol. Biol. Evol. 24(12):2669-2680.
  363. Levin II, Outlaw DC, Vargas FH, Parker PG. Plasmodium blood parasite found in endangered Galapagos penguins (Spheniscus mendiculus). 2009. Biological Conservation 142(12):3191-3195.
  364. Levin II, Valkiunas G, Iezhova TA, O'Brien SL, Parker PG. Novel Haemoproteus species (Haemosporida: Haemoproteidae) from the swallow-tailed gull (Lariidae), with remarks on the host range of hippoboscid-transmitted avian hemoproteids. 2012. J. Parasitology 98(4):847-854.
  365. Levin II, Valkiunas G, Santiago-Alarcon D, Cruz LL, Iezhova TA, O'Brien SL, Hailer F, Dearborn D, Schreiber EA, Fleischer RC, Ricklefs RE, Parker PG. Hippoboscid-transmitted Haemoproteus parasites (Haemosporida) infect Galapagos Pelecaniform birds: evidence from molecular and morphological studies, with a description of Haemoproteus iwa. 2011. International J. Parasitology 41(10):1019-1027.
  366. Li DM, de Hoog GS, Saunte DML, van den Ende AHGG, Chen XR. Coniosporium epidermidis sp. nov., a new species from human skin. 2008. Stud. Mycol. 61(1):131-136.
  367. Li DM, Li RY, de Hoog GS, Wang YX, Wang DL. Exophiala asiatica, a new species from a fatal case in China. 2009. Med. Mycol. 47(1):101-109.
  368. Li C, Lu G, Orti G. Optimal data partitioning and a test case for ray-finned fishes (Actinopterygii) based on ten nuclear loci. 2008. Syst. Biol. 57(4):519-539.
  369. Li C, Matthes-Rosana KA, Garcia M, Naylor GJP. Phylogenetics of Chondrichthyes and the problem of rooting phylogenies with distant outgroups. 2012. Mol. Phylogenet. Evol. 63(2):365-373.
  370. Li C, Orti G. Molecular phylogeny of Clupeiformes (Actinopterygii) inferred from nuclear and mitochondrial DNA sequences. 2007. Mol. Phylogenet. Evol. 44(1):386-398.
  371. Li C, Orti G, Zhao J. The phylogenetic placement of sinipercid fishes ("Perciformes") revealed by 11 nuclear loci. 2010. Mol. Phylogenet. Evol. 56(3):1096-1104.
  372. Li C, Orti G, Zhang G, Lu G. A practical approach to phylogenomics: the phylogeny of ray-finned fish (Actinopterygii) as a case study. 2007. BMC Evol. Biol. 7:44.
  373. Li C, Ricardo BR, Smith WL, Orti G. Monophyly and interrelationships of Snook and Barramundi (Centropomidae sensu Greenwood) and five new markers for fish phylogenetics. 2011. Mol. Phylogenet. Evol. 60(3):463-471.
  374. Li C, Riethoven JJ, Ma L. Exon-primed intron-crossing (EPIC) markers for non-model teleost fishes. 2010. BMC Evol. Biol. 10:90.
  375. Liang G, Li T, Yin ZH, Lei FM. Molecular phylogenetic analysis of some Fringillidae species based on mitochondrial CoI gene sequences. 2008. Zoological Research 29(5):465-475.
  376. Lilburn TG, Gu J, Cai H, Wang Y. Comparative genomics of the family Vibrionaceae reveals the wide distribution of genes encoding virulence-associated proteins. 2010. BMC Genomics 11(1):369.
  377. Lissovsky AA, Ivanova NV, Borisenko AV. Molecular phylogenetics and taxonomy of the subgenus pika (Ochotona, Lagomorpha). 2007. Journal of Mammalogy 88(5):1195–1204.
  378. Lissovsky AA, Obolenskaya EV, Abramson NI, Dokuchaev NE, Yakimenko VV, Mal’kova MG, Bogdanov AS, Ivanova NV. Geographic variation of Microtus middendorffii (Cricetidae, Arvicolinae, Rodentia) sensu lato studied by craniometrical and mitochondrial features. 2010. Russian J. Theriol. 9(2):71-81.
  379. Liu Y, Leigh JW, Brinkmann H, Cushion MT, Rodriguez-Ezpeleta N, Philippe H, Lang BF. Phylogenomic analyses support the monophyly of Taphrinomycotina, including Schizosaccharomyces fission yeasts. 2009. Mol. Biol. Evol. 26(1):27-34.
  380. Lombard J, Lopez-Garcia P, Moreira D. An ACP-independent fatty acid synthesis pathway in Archaea: implications for the origin of phospholipids. 2012. Mol. Biol. Evol. 29:3261-3265.
  381. Lombard J, Moreira D. Origins and early evolution of the mevalonate pathway of isoprenoid biosynthesis in the three domains of life. 2010. Mol. Biol. Evol. 28(1):87-99.
  382. Lombard J, Moreira D. Early evolution of the biotin-dependent carboxylase family. 2011. BMC Evolutionary Biology 11(1):232.
  383. Lopes SS, Yang X, Muller J, Carney TJ, McAdow AR, Rauch GJ, Jacoby AS, Hurst LD, Delfino-Machin M, Haffter P, Geisler R, Johnson SL, Ward A, Kelsh RN. Leukocyte tyrosine kinase functions in pigment cell development. 2008. PLoS Genet. 4(3):e1000026.
  384. Lopez JA, Chen WJ, Orti G. Esociform phylogeny. 2004. Copeia 2004(3):449-464.
  385. Lopez-Archilla AI, Gerard E, Moreira D, Lopez-Garcia P. Macrofilamentous microbial communities in the metal-rich and acidic River Tinto, Spain. 2004. FEMS Microbiol Lett. 235(2):221-228.
  386. Lopez-Archilla AI, Moreira D, Velasco S, Lopez-Garcia P. Archaeal and bacterial community composition of a pristine coastal aquifer in Donana National Park, Spain. 2007. Aquat. Microb. Ecol. 47:123-139.
  387. Lopez-Garcia P, Kazmierczak J, Benzerara K, Kempe S, Guyot F, Moreira D. Bacterial diversity and carbonate precipitation in the giant microbialites from the highly alkaline Lake Van, Turkey. 2005. Extremophiles 9(4):263-274.
  388. Lopez-Garcia P, Vereshchaka A, Moreira D. Eukaryotic diversity associated with carbonates and fluid-seawater interface in Lost City hydrothermal field. 2007. Environ. Microbiol. 9(2):546-554.
  389. Lopez-Legentil S, Erwin PM, Pawlik JR, Song B. Effects of sponge bleaching on ammonia-oxidizing Archaea: distribution and relative expression of ammonia monooxygenase genes associated with the barrel sponge Xestospongia muta. 2010. Microbial Ecology 0(0):???-???.
  390. Lopez-Legentil S, Turon X, Planes S. Genetic structure of the star sea squirt, Botryllus schlosseri, introduced in southern European harbours. 2006. Molecular Ecology 15(13):3957-3967.
  391. Luciano J, Agrebi R, Le Gall AV, Wartel M, Fiegna F, et al.. Emergence and modular evolution of a novel motility machinery in bacteria. 2011. PLoS Genet. 7(9):e1002268.
  392. Lundberg JG, Sullivan JP, Rodiles-Hernandez R, Hendrickson DA. Discovery of African roots for the Mesoamerican Chiapas catfish, Lacantunia enigmatica, requires an ancient intercontinental passage. 2007. Proc. Acad. Nat. Sci. Philadelphia 156:39-53.
  393. Luo X, Qu YH, Han LX, Li SH, Lei FM. A phylogenetic analysis of laughingthrushes (Timaliidae: Garrulax) and allies based on mitochondrial and nuclear DNA sequences. 2008. Zoologica Scripta 0(0):???-???.
  394. Ma C, Liu C, Yang P, Kang L. The complete mitochondrial genomes of two band-winged grasshoppers, Gastrimargus marmoratus and Oedaleus asiaticus. 2009. BMC Genomics 10:156.
  395. Ma C, Ma L, Ni Y, Shen A, Zhang Y, Zhang F, Zhao Y. Phylogenetic relationship of Thryssa inferred from morphologicc haracteristic and mitochondrial 16S rRNA gene sequences. 2010. J. Fishery Sciences of China 17(3):471-477.
  396. Machado A, Lopez M, Almeida T, Hernandez M. Mitochondrial DNA phylogenetic analysis of the genus Laparocerus (Coleoptera, Curculionidae, Entiminae). I. The Madeiran clade. 2008. Zoologica Scripta 37(4):415-427.
  397. Mackiewicz P, Bodyl A, Gagat P. Possible import routes of proteins into the cyanobacterial endosymbionts/plastids of Paulinella chromatophora. 2012. Theory in Biosciences 131(1):1-18.
  398. Mackiewicz P, Wyroba E. Phylogeny and evolution of Rab7 and Rab9 proteins. 2009. BMC Evol. Biol. 9(1):101.
  399. Majewski W, Pawlowski J. Morphologic and molecular diversity of the foraminiferal genus Globocassidulina in Admiralty Bay, King George Island. 2010. Antarctic Science 0(0):???-???.
  400. Makino W, Tanabe AS. Extreme population genetic differentiation and secondary contact in the freshwater copepod Acanthodiaptomus pacificus in the Japanese Archipelago. 2009. Molecular Ecology 18(17):3699-3713.
  401. Mantooth SJ. From the valleys to the mountains: the biogeographic history of antelope squirrels, bats, and chipmunks in Western North America. 2010. Dissertation, University of Nevada, Las Vegas.
  402. Mantooth SJ, Hafner DJ, Bryson RW, Riddle BR. Phylogeographic diversification of antelope squirrels (Ammospermophilus) across North American deserts. 2013. Biological Journal of the Linnean Society 0:???-???.
  403. Marais G. Evolution du genome et recombinaison: le cas des chromosomes sexuels. 2009. Memoire pour l'habilitation, Universite Lyon.
  404. Marande W, Lopez-Garcia P, Moreira D. Eukaryotic diversity and phylogeny using small- and large-subunit ribosomal RNA genes from environmental samples. 2009. Environ. Microbiol. 11(12):3179-3188.
  405. Marcelino JM, Borrego P, Rocha C, Barroso H, Quintas A, Novo C, Taveira N. Potent and broadly reactive HIV-2 neutralizing antibodies elicited by a vaccinia virus vector prime-C2V3C3 polypeptide boost immunization strategy. 2010. J. Virol. 84(23):12429-12436.
  406. Marcussen T, Blaxland K, Windham MD, Haskins KE, Armstrong F. Establishing the phylogenetic origin, history, and age of the narrow endemic Viola guadalupensis (Violaceae). 2011. Am. J. Botany 98:1978-1988.
  407. Marcussen T, Jakobsen KS, Danihelka J, Ballard HE, Blaxland K, Brysting AK, Oxelman B. Inferring species networks from gene trees in high-polyploid North American and Hawaiian violets (Viola, Violaceae). 2012. Systematic Biology 61(1):107-126.
  408. Marcussen T, Oxelman B, Skog A, Jakobsen KS. Evolution of plant RNA polymerase IV/V genes: evidence of subneofunctionalization of duplicated NRPD2/NRPE2-like paralogs in Viola (Violaceae). 2010. BMC Evol. Biol. 10(1):45.
  409. Marletaz F, Gilles A, Caubit X, Perez Y, Dossat C, Samain S, Gyapay G, Wincker P, Le Parco Y. Chaetognath transcriptome reveals ancestral and unique features among bilaterians. 2008. Genome Biol. 9(6):R94.
  410. Marletaz F, Le Parco Y. Careful with understudied phyla: the case of chaetognath. 2008. BMC Evol. Biol. 8(1):251.
  411. Martin T, Biruma M, Fridborg I, Okori P, Dixelius C. A highly conserved NB-LRR encoding gene cluster effective against Setosphaeria turcica in sorghum. 2011. BMC Plant Biology 11(1):151.
  412. Martin P, Dabert M, Dabert J. Molecular evidence for species separation in the water mite Hygrobates nigromaculatus Lebert, 1879 (Acari, Hydrachnidia): evolutionary consequences of the loss of larval parasitism. 2010. Aquatic Sciences 72(3):347-360.
  413. Martin P, Dorn NJ, Kawai T, van der Heiden C, Scholtz G. The enigmatic Marmorkrebs (marbled crayfish) is the parthenogenetic form of Procambarus fallax (Hagen, 1870). 2010. Contributions to Zoology 79(3):107-118.
  414. Martin-Cuadrado AB, Rodriguez-Valera F, Moreira D, Alba JC, Ivars-Martinez E, Henn MR, Talla E, Lopez-Garcia P. Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions. 2008. ISME J. 2(8):865-886.
  415. Martinez-Sanudo I. Phylogenetic studies of tephritid flies (Diptera, Tephritidae) and their symbiotic bacteria. 2009. Tesi di dottorato, Padova.
  416. Masello JF, Quillfeldt P, Munimanda GK, Klauke N, Segelbacher G, Schaefer HM, Failla M, Cortes M, Moodley Y. The high Andes, gene flow and a stable hybrid zone shape the genetic structure of a wide-ranging South American parrot. 2011. Front. Zool. 8(1):16.
  417. Masta SE. Mitochondrial rRNA secondary structures and genome arrangements distinguish chelicerates: comparisons with a harvestman (Arachnida: Opiliones: Phalangium opilio). 2010. Gene 449(1-2):9-21.
  418. Masuya H, Kusunoki M, Kosaka H, Aikawa T. Haradamyces foliicola anam. gen. et sp. nov., a cause of zonate leaf blight disease in Cornus florida in Japan. 2008. Mycological Research 113(2):173-181.
  419. Mathews LM, Anker A. Molecular phylogeny reveals extensive ancient and ongoing radiations in a snapping shrimp species complex (Crustacea, Alpheidae, Alpheus armillatus). 2009. Mol. Phylogenet. Evol. 50(2):268-281.
  420. Matsudaira K, Ishida T. Phylogenetic relationships and divergence dates of the whole mitochondrial genome sequences among three gibbon genera. 2010. Mol. Phylogenet. Evol. 55(2):454-459.
  421. Matsui M, Hamidy A, Belabut DM, Ahmad N, Panha S, Sudin A, Khonsue W, Oh HS, Yong HS, Jiang JP, Nishikawa K. Systematic relationships of Oriental tiny frogs of the family Microhylidae (Amphibia, Anura) as revealed by mtDNA genealogy. 2011. Mol. Phylogenet. Evol. 61(1):167-176.
  422. Matsui M, Hamidy A, Murphy RW, Khonsue W, Yambun P, Shimada T, Ahmad N, Belabut DM, Jiang JP. Phylogenetic relationships of megophryid frogs of the genus Leptobrachium (Amphibia, Anura) as revealed by mtDNA gene sequences. 2010. Mol. Phylogenet. Evol. 56(1):259-272.
  423. Matsuura T, Mizuno A, Tsukamoto T, Shimizu Y, Saito N, Sato S, Kikuchi S, Uzuki T, Azegami K, Sawada H. Erwinia uzenensis sp. nov., a novel pathogen that affects European pear trees (Pyrus communis L.). 2012. Int. J. Syst. Evol. Microbiol. 62:1799-1803.
  424. Meyer A, Witek A, Lieb B. Selecting ribosomal protein genes for invertebrate phylogenetic inferences: how many genes to resolve the Mollusca? 2011. Methods in Ecology and Evolution, 2:34-42.
  425. Mazzon L, Martinez-Sanudo I, Simonato M, Squartini A, Savio C, Girolami V. Phylogenetic relationships between flies of the Tephritinae subfamily (Diptera, Tephritidae) and their symbiotic bacteria. 2010. Mol. Phylogenet. Evol. 56(1):312-326.
  426. McCarthy AJ, Shaw MA, Goodman SJ. Pathogen evolution and disease emergence in carnivores. 2007. Proc. R. Soc. B. 274(1629):3165-3174.
  427. McCranie JR, Gutsche A, Kohler F, Orellana LV. Recently discovered populations of the Honduran endemic salamanders Oedipina kasios and Oedipina quadra (Caudata: Plethodontidae). 2011. Salamandra 47(3):169-172.
  428. McKay T, Christian AD, Harris JL, Inoue K. Southern Hickorynut, Obovaria jacksoniana (Frierson, 1912), its closest congeners, and Villosa arkansasensis. 2009. Submitted to Arkansas Game and Fish Commission.
  429. Meerow AW, Noblick L, Borrone JW, Couvreur TLP, Mauro-Herrera M, Hahn WJ, Kuhn DN, Nakamura K, Oleas NH, Schnell RJ. Phylogenetic analysis of seven WRKY genes across the palm subtribe Attaleinae (Arecaceae) identifies syagrus as sister group of the coconut. 2009. PLoS ONE 4(10):e7353.
  430. Meister J, Hubaishan MA, Kilian N, Oberprieler C. Temporal and spatial diversification of the shrub Justicia areysiana Deflers (Acanthaceae) endemic to the monsoon affected coastal mountains of the southern Arabian Peninsula. 2006. Pl. Syst. Evol. 262:153-171.
  431. Melaun C. Phylogenetische und toxinologische Untersuchungen an Conidae (Mollusca: Gastropoda) unter besonderer Berucksichtigung west-atlantischer Vertreter der Gattung Conus. 2008. Dissertation, Justus Liebig Universitat Giessen.
  432. Mellott DO, Burke RD. The molecular phylogeny of eph receptors and ephrin ligands. 2008. BMC Cell Biol. 9(1):27.
  433. Melnikov DA, Ananjeva NB, Papenfuss TJ. A new species of Pseudotrapelus (Agamidae, Sauria) from Nizwa, Oman. 2013. Russian J. Herpetology 20(1):79-84.
  434. Millanes AM, Diederich P, Ekman S, Wedin M. Phylogeny and character evolution in the jelly fungi (Tremellomycetes, Basidiomycota, Fungi). 2011. Mol. Phylogenet. Evol. 61(1):12-28.
  435. Miller KB, Bergsten J, Whiting MF. Phylogeny and classification of diving beetles in the tribe Cybistrini (Coleoptera, Dytiscidae, Dytiscinae). 2007. Zoologica Scripta 36(1):41-59.
  436. Min GS, Park JK. Eurotatorian paraphyly: Revisiting phylogenetic relationships based on the complete mitochondrial genome sequence of Rotaria rotatoria (Bdelloidea: Rotifera: Syndermata). 2009. BMC Genomics 10:533.
  437. Minge MA, Silberman JD, Orr RJ, Cavalier-Smith T, Shalchian-Tabrizi K, Burki F, Skjaeveland A, Jakobsen KS. Evolutionary position of breviate amoebae and the primary eukaryote divergence. 2009. Proc. Biol. Sci. 276(1657):597-604.
  438. Modica MV, Bouchet P, Cruaud C, Utge J, Oliverio M. Molecular phylogeny of the nutmeg shells (Neogastropoda, Cancellariidae). 2011. Mol. Phylogenet. Evol. 59(3):685-697.
  439. Modica MV, Verhecken A, Oliverio M. The relationships of the enigmatic neogastropod Loxotaphrus (Cancellariidae). 2011. New Zealand Journal of Geology and Geophysics 54(1):115-124.
  440. Moller-Krull M, Delsuc F, Churakov G, Marker C, Superina M, Brosius J, Douzery EJ, Schmitz J. Retroposed elements and their flanking regions resolve the evolutionary history of xenarthran mammals (armadillos, anteaters and sloths). 2007. Mol. Biol. Evol. 24(11):2573-2582.
  441. Moniz MB, Rindi F, Guiry MD. Phylogeny and taxonomy of Prasiolales (Trebouxiophyceae, Chlorophyta) from Tasmania, including Rosenvingiella tasmanica sp. nov.. 2012. Phycologia 51(1):86-97.
  442. Moniz MB, Rindi F, Novis PM, Broady PA, Guiry MD. Molecular phylogeny of Antarctic Prasiola (Prasiolales, Trebouxiophyceae) reveals extensive cryptic diversity. 2012. J. Phycology 48(4):940-955.
  443. Moodley Y, Bruford MW. Molecular biogeography: towards an integrated framework for conserving pan-African biodiversity. 2007. PLoS ONE 2(5):e454.
  444. Moodley Y, Linz B, Bond RP, Nieuwoudt M, Soodyall H, Schlebusch CM, Bernhoft S, Hale J, Suerbaum S, Mugisha L, van der Merwe SW, Achtman M. Age of the association between Helicobacter pylori and man. 2012. PLoS Pathog. 8(5):e1002693.
  445. Moodley Y, Linz B, Yamaoka Y, Windsor HM, Breurec S, Wu JY, Maady A, Bernhoft S, Thiberge JM, Phuanukoonnon S, Jobb G, Siba P, Graham DY, Marshall BJ, Achtman M. The peopling of the Pacific from a bacterial perspective. 2009. Science 323(5913):527-530.
  446. Moreira D, Rodriguez-Valera F, Lopez-Garcia P. Analysis of a genome fragment of a deep-sea uncultivated Group II euryarchaeote containing 16S rDNA, a spectinomycin-like operon and several energy metabolism genes. 2004. Environ. Microbiol. 6(9):959-969.
  447. Moreira D, Rodriguez-Valera F, Lopez-Garcia P. Metagenomic analysis of mesopelagic Antarctic plankton reveals a novel deltaproteobacterial group. 2006. Microbiology 152(2):505-517.
  448. Moriscot C, Gribaldo S, Jault JM, Krupovic M, Arnaud J, et al.. Crenarchaeal CdvA Forms Double-Helical Filaments Containing DNA and Interacts with ESCRT-III-Like CdvB. 2011. PLoS ONE 6(7):e21921.
  449. Morissette E, Massung RF, Foley JE, Alleman AR, Foley P, Barbet AF. Diversity of Anaplasma phagocytophilum strains, USA. 2009. Emerg. Infect. Dis. 15(6):928-931. Available from http://www.cdc.gov/EID/content/15/6/928.htm
  450. Moriyama T, Terasawa K, Fujiwara M, Sato N. Purification and characterization of organellar DNA polymerases in the red alga Cyanidioschyzon merolae. 2008. FEBS Journal 275(11):2899-2918.
  451. Moszczynski K, Mackiewicz P, Bodyl A. Evidence for horizontal gene transfer from Bacteroidetes bacteria to dinoflagellate minicircles. 2012. Mol. Biol. Evol. 29:887-892.
  452. Moussard H, Moreira D, Cambon-Bonavita MA, Lopez-Garcia P, Jeanthon C. Uncultured Archaea in a hydrothermal microbial assemblage: phylogenetic diversity and characterization of a genome fragment from a euryarchaeote. 2006. FEMS Microbiol Ecol. 57(3):452-469.
  453. Mulkidjanian AY, Galperin MY, Makarova KS, Wolf YI, Koonin EV. Evolutionary primacy of sodium bioenergetics. 2008. Biol. Direct 3:13.
  454. Mwinyi A, Meyer A, Bleidorn C, Lieb B, Bartolomaeus T, Podsiadlowski L. Mitochondrial genome sequence and gene order of Sipunculus nudus give additional support for an inclusion of Sipuncula into Annelida. 2009. BMC Genomics 10(1):27.
  455. Naher M, Motohash K, Watanabe H, Chikuo Y, Senda M, Suga H, Brasier C, Kageyama K. Phytophthora chrysanthemi sp. nov., a new species causing root rot of chrysanthemum in Japan. 2010. Mycological Progress 0(0):???-???.
  456. Najafzadeh MJ, Sun J, Vicente V, Xi L, Gerrits van den Ende AHG, de Hoog GS. Fonsecaea nubica sp. nov, a new agent of human chromoblastomycosis revealed using molecular data. Medical Mycology 0(0):???-???.
  457. Nakano T. A new sexannulate species of Orobdella (Hirudinida, Arhynchobdellida, Orobdellidae) from Yakushima Island, Japan. 2012. Zookeys 181:79–93.
  458. Nakano T, Lai YT. A new species of Orobdella (Hirudinida, Arhynchobdellida, Orobdellidae) from Taipei, Taiwan. 2012. Zookeys 207:49-63.
  459. Nakano T, Ramlah Z, Hikida T. Phylogenetic position of gastrostomobdellid leeches (Hirudinida, Arhynchobdellida, Erpobdelliformes) and a new family for the genus Orobdella. 2012. Zoologica Scripta 41(2):177-185.
  460. Nakase Y, Kato M. Cryptic diversity and host specificity in giant Xenos Strepsipterans parasitic in large Vespa hornets. 2013. Zoological Science 30(4):331-336.
  461. Narasingarao P, Podell S, Ugalde JA, Brochier-Armanet C, Emerson JB, et al.. De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities. 2011. The ISME Journal 6:81-93.
  462. Negrisolo E, Bargelloni L, Patarnello T, Ozouf-Costaz C, Pisano E, di Prisco G, Verde C. Comparative and evolutionary genomics of globin genes in fish. 2008. Methods Enzymol. 436:511-538.
  463. Negrisolo E, Kuhl H, Forcato C, Vitulo N, Reinhardt R, Patarnello T, Bargelloni L. Different phylogenomic approaches to resolve the evolutionary relationships among model fish species. 2010. Mol. Biol. Evol. 27(12):2757-2774.
  464. Neiswenter SA, Riddle BR. Diversification of the Perognathus flavus species group in emerging arid grasslands of western North America. 2010. Journal of Mammalogy 91(2):348-362.
  465. Nery MF, Gonzalez DJ, Hoffmann FG, Opazo JC. Resolution of the laurasiatherian phylogeny: evidence from genomic data. 2012. Mol. Phylogenet. Evol. 64(3):685-689.
  466. Nesnidal MP, Helmkampf M, Bruchhaus I, Hausdorf B. The complete mitochondrial genome of Flustra foliacea (Ectoprocta, Cheilostomata) - compositional bias affects phylogenetic analyses of lophotrochozoan relationships. 2011. BMC Genomics 12(1):572.
  467. Neubert K. Diversitat der mit Schilf (Phragmites australis) assoziierten Mycoflora. 2006. Dissertation, Konstanz.
  468. Neubert K, Mendgen K, Brinkmann H, Wirsel SG. Only a few fungal species dominate highly diverse mycofloras associated with the common reed. 2006. Appl. Environ. Microbiol. 72(2):1118-1128.
  469. Nguyen MA, Klaere S, von Haeseler A. MISFITS: evaluating the goodness of fit between a phylogenetic model and an alignment. 2011. Mol. Biol. Evol. 28(1):143-152.
  470. Nikoh N, McCutcheon JP, Kudo T, Miyagishima SY, Moran NA, Nakabachi A. Bacterial genes in the aphid genome: absence of functional gene transfer from Buchnera to its host. 2010. PLoS Genet. 6(2):e1000827.
  471. Nilsson MA. The structure of the Australian and South American marsupial mitochondrial control region. 2009. Mitochondrial DNA 20(5-6):126-138.
  472. Nilsson MA, Harlid A, Kullberg M, Janke A. The impact of fossil calibrations, codon positions and relaxed clocks on the divergence time estimates of the native Australian rodents (Conilurini). 2010. Gene 455(1-2):22-31.
  473. Nilsson MA, Janke A, Murchison EP, Ning Z, Hallstrom BM. Expansion of CORE-SINEs in the genome of the Tasmanian devil. 2012. BMC Genomics 13(1):172.
  474. Ni-Ni-Win, Hanyuda T, Draisma SGA, Furnari G, Meinesz A, Kawai H. Padina ditristromatica sp. nov. and Padina pavonicoides sp. nov. (Dictyotales, Phaeophyceae), two new species from the Mediterranean Sea based on morphological and molecular markers. 2011. European J. Phycology 46(4):327-341.
  475. Nishi H, Sota T. Geographical divergence in the Japanese land snail Euhadra herklotsi inferred from its molecular phylogeny and genital characters. 2007. Zoological Science 24(5):475–485.
  476. Nishikawa K, Matsui M, Yong HS, Ahmad N, Yambun P, Belabut DM, Sudin A, Hamidy A, Orlov NL, Ota H, Yoshikawa N, Tominaga A, Shimada T. Molecular phylogeny and biogeography of caecilians from Southeast Asia (Amphibia, Gymnophiona, Ichthyophiidae), with special reference to high cryptic species diversity in Sundaland. 2012. Mol. Phylogenet. Evol. 63(3):714-723.
  477. Nishizawa T, Kurabayashi A, Kunihara T, Sano N, Fujii T, Sumida M. Mitochondrial DNA diversification, molecular phylogeny, and biogeography of the primitive rhacophorid genus Buergeria in East Asia. 2011. Mol. Phylogenet. Evol. 59(1):139-147.
  478. Nogueira MB, Stella V, Bordignon J, Batista WC,de Borba L, da Silva LHP, Hoffmann FG, Probst CM, Duarte dos Santos CN. Evidence for the co-circulation of dengue virus type 3 genotypes III and V in the Northern region of Brazil during the 2002-2004 epidemics. 2008. Mem. Inst. Oswaldo Cruz, Rio de Janeiro 103(5):483-488.
  479. Nubel U, Dordel J, Kurt K, Strommenger B, Westh H, Shukla SK, Zemlickova H, Leblois R, Wirth T, Jombart T, Balloux F, Witte W. A timescale for evolution, population expansion, and spatial spread of an emerging clone of methicillin-resistant Staphylococcus aureus. 2010. PLoS Pathog 6(4):e1000855.
  480. Nunes-Santos C, Ayres JM, Sampaio I, Schneider H. Molecular discrimination of pouched four-eyed opossums from the Mamiraua Reserve in the Brazilian Amazon. 2006. Genet. Mol. Biol. vol.29, no.2, Sao Paulo 2006.
  481. Nyaoke A, Weber ES, Innis C, Stremme D, Dowd C, Hinckley L, Gorton T, Wickes B, Sutton D, de Hoog S, Frasca S Jr. Disseminated phaeohyphomycosis in weedy seadragons (Phyllopteryx taeniolatus) and leafy seadragons (Phycodurus eques) caused by species of Exophiala, including a novel species. 2009. J. Vet. Diagn. Invest. 21(1):69-79.
  482. Nystedt B, Frank C, Thollesson M, Andersson SG. Diversifying selection and concerted evolution of a type IV secretion system in Bartonella. 2007. Mol. Biol. Evol. 25(2):287-300.
  483. Oaks JR. Phylogenetic systematics, biogeography, and evolutionary ecology of the true crocodiles (Eusuchia: Crocodylidae: Crocodylus). 2007. Thesis, Louisiana State University.
  484. Oba Y, Yamauchi A, Hashiguchi Y, Satone H, Miki S, Nassef M, Shimasaki Y, Kitano T, Nakao M, Kawabata SI, Honjo T, Oshima Y. Purification and characterization of tributyltin-binding protein of tiger puffer, Takifugu rubripes. 2011. Comparative Biochemistry and Physiology Part C: Toxicology and Pharmacology 153(1):17-23.
  485. Oberprieler C. Temporal and spatial diversification of Circum-Mediterranean Compositae-Anthemideae. 2005. Taxon 54(4):951-966.
  486. Oberprieler C, Himmelreich S, Vogt R. A new subtribal classification of the tribe Anthemideae (Compositae). 2007. Willdenowia 37:89-114.
  487. Oberprieler C, Vogt R. The taxonomic position of Matricaria macrotis (Compositae, Anthemideae). 2006. Willdenowia 36(1):329-338.
  488. Obolenskaya EV, Lee MY, Dokuchaev NE, Oshida T, Lee MS, Lee H, Lissovsky AA. Diversity of Palaearctic chipmunks (Tamias, Sciuridae). 2009. Mammalia 73(4):281-298.
  489. Oceguera-Figueroa A, Phillips AJ, Pacheco-Chaves B, Reeves WK, Siddall ME. Phylogeny of macrophagous leeches (Hirudinea, Clitellata) based on molecular data and evaluation of the barcoding locus. 2011. Zoologica Scripta 40(2):194-203.
  490. O'Grady P, Desalle R. Out of Hawaii: the origin and biogeography of the genus Scaptomyza (Diptera: Drosophilidae). 2008. Biol. Lett. 4(2):195-199.
  491. Ohnishi N, Uno R, Ishibashi Y, Tamate HB, Oi T. The influence of climatic oscillations during the Quaternary Era on the genetic structure of Asian black bears in Japan. 2009. Heredity 102(6):579-589.
  492. Ohst T. Genetische Einflusse allochthoner Wasserfrosche auf endemische Wasserfroschpopulationen (R. kl. esculenta Komplex). 2008. Dissertation, Humboldt-Universitat zu Berlin.
  493. Okamoto T, Hikida T. Three genetic lineages of the Japanese skink Plestiodon japonicus (Scincidae, Squamata) and the genetic composition of their contact zones. 2009. J. Zool. Syst. Evol. Res. 47(2):181-188.
  494. Okamoto T, Motokawa J, Toda M, Hikida T. Parapatric distribution of the lizards Plestiodon (formerly Eumeces) latiscutatus and P. japonicus (Reptilia: Scincidae) around the Izu Peninsula, central Japan, and its biogeographic implications. 2006. Zoological Science 23(5):419-425.
  495. Okamura K, Kawai A, Yamada T, Hiraishi A. Acidipila rosea gen. nov., sp. nov., an acidophilic chemoorganotrophic bacterium belonging to the phylum Acidobacteria. 2011. FEMS Microbiology Letters 317(2):138-142.
  496. Okuyama Y, Tanabe AS, Kato M. Entangling ancient allotetraploidization in Asian Mitella: an integrated approach for multilocus combinations. 2011. Mol. Biol. Evol. 29:429-439.
  497. Olia M, Ahmad W, Araki M, Minaka N. Molecular characterisation of some species of Mylonchulus (Nematoda: Mononchida) from Japan and comments on the status of Paramylonchulus and Pakmylonchulus. 2009. Nematology 11(3):337-342.
  498. Oliveira C, Avelino GS, Abe KT, Mariguela TC, Benine RC, et al.. Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling. 2011. BMC Evolutionary Biology 11(1):275.
  499. Oliveira DCSG, Almeida FC, O'Grady PM, Armella MA, DeSalle R, Etges WJ. Monophyly, divergence times, and evolution of host plant use inferred from a revised phylogeny of the Drosophila repleta species group. 2012. Mol. Phylogenet. Evol. 0(0):???-???.
  500. Oliverio M, Modica MV. Relationships of the haematophagous marine snail Colubraria (Rachiglossa: Colubrariidae), within the neogastropod phylogenetic framework. 2010. Zoological Journal of the Linnean Society 158(4):779-800.
  501. Omelchenko MV, Galperin MY, Wolf YI, Koonin EV. Non-homologous isofunctional enzymes: a systematic analysis of alternative solutions in enzyme evolution. 2010. Biol. Direct 5:31.
  502. Olsson U, Alstrom P, Svensson L, Aliabadian M, Sundberg P. The Lanius excubitor (Aves, Passeriformes) conundrum - taxonomic dilemma when molecular and non-molecular data tell different stories. 2010. Mol. Phylogenet. Evol. 55:347-357.
  503. Opazo JC, Butts GT, Nery MF, Storz JF, Hoffmann FG. Whole-genome duplication and the functional diversification of Teleost fish hemoglobins. 2013. Mol. Biol. Evol. 30:140-153.
  504. Opazo JC, Hoffmann FG, Storz JF. Genomic evidence for independent origins of beta-like globin genes in monotremes and therian mammals. 2008. Proc. Natl. Acad. Sci. USA 105(5):1590-1595.
  505. Opazo JC, Hoffmann FG, Storz JF. Differential loss of embryonic globin genes during the radiation of placental mammals. 2008. Proc. Natl. Acad. Sci. USA 105(35):12950-12955.
  506. Opazo JC, Sloan AM, Campbell KL, Storz JF. Origin and ascendancy of a chimeric fusion gene: the {beta}/{delta}-globin gene of paenungulate mammals. 2009. Mol. Biol. Evol. 26(7):1469-1478.
  507. Opgen-Rhein R, Strimmer K. Accurate ranking of differentially expressed genes by a distribution-free shrinkage approach. 2007. Stat. Appl. Genet. Mol. Biol. 6(1):9.
  508. Opgen-Rhein R, Fahrmeir L, Strimmer K. Inference of demographic history from genealogical trees using reversible jump Markov chain Monte Carlo. 2005. BMC Evol. Biol. 5:6.
  509. Orabi J, Backes G, Wolday A, Yahyaoui A, Jahoor A. The Horn of Africa as a centre of barley diversification and a potential domestication site. 2007. Theor. Appl. Genet. 114(6):1117-1127.
  510. Orr RJS, Stuken A, Rundberget T, Eikrem W, Jakobsen KS. Improved phylogenetic resolution of toxic and non-toxic Alexandrium strains using a concatenated rDNA approach. 2011. Harmful Algae 10(6):676-688.
  511. Orti G, Sivasundar A, Dietz K, Jegu M. Phylogeny of the Serrasalmidae (Characiformes) based on mitochondrial DNA sequences. 2008. Genetics and Molecular Biology 31(Suppl 1):343-351.
  512. Ota Y, Tanaka K, Hirose M, Hirose E. Description of a new species of Elaphognathia (Isopoda: Gnatheidae) from Japan based on morphological and molecular traits. 2010. J. Crustacean Biology 30(4):710-720.
  513. Outlaw DC, Ricklefs RE. On the phylogenetic relationships of haemosporidian parasites from raptorial birds (Falconiformes and Strigiformes). 2009. J. Parasitology. 95(5):1171-1176.
  514. Outlaw DC, Ricklefs RE. Comparative gene evolution in haemosporidian (apicomplexa) parasites of birds and mammals. 2010. Mol. Biol. Evol. 27(3):537-542.
  515. Outlaw DC, Voelker G. Pliocene climatic change in insular Southeast Asia as an engine of diversification in Ficedula flycatchers. 2007. Journal of Biogeography 35(4):739-752.
  516. Outlaw DC, Voelker G. Systematics of Ficedula flycatchers (Muscicapidae): a molecular reassessment of a taxonomic enigma. 2006. Mol. Phylogenet. Evol. 41(1):118-126.
  517. Outlaw RK, Voelker G, Bowie RCK. Shall we chat? Evolutionary relationships in the genus Cercomela (Muscicapidae) and its relation to Oenanthe reveals extensive polyphyly among chats distributed in Africa, India and the Palearctic. 2010. Mol. Phylogenet. Evol. 55(1):284-292.
  518. Outlaw RK, Voelker G, Outlaw DC. Molecular systematics and historical biogeography of the rock-thrushes (Muscicapidae: Monticola). 2007. The Auk 124(2):561–577.
  519. Ozawa T, Kohler F, Reid DG, Glaubrecht M. Tethyan relicts on continental coastlines of the northwestern Pacific Ocean and Australasia: molecular phylogeny and fossil record of batillariid gastropods (Caenogastropoda, Cerithioidea). 2009. Zoologica Scripta 38(5):503-525.
  520. Palma RE, Cancino RA, Rodriguez-Serrano E. Molecular systematics of Abrothrix longipilis (Rodentia: Cricetidae: Sigmodontinae) in Chile. 2010. J. Mammalogy 91(5):1102-1111.
  521. Palo JU, Vainola R. The enigma of the landlocked Baikal and Caspian seals addressed through phylogeny of phocine mitochondrial sequences. 2006. Biological Journal of the Linnean Society 88(1):61–72.
  522. Paps J, Baguna J, Riutort M. Lophotrochozoa internal phylogeny: new insights from an up-to-date analysis of nuclear ribosomal genes. 2009. Proc. Biol. Sci. 276(1660):1245-1254.
  523. Patane JS, Weckstein JD, Aleixo A, Bates JM. Evolutionary history of Ramphastos toucans: molecular phylogenetics, temporal diversification, and biogeography. 2009. Mol. Phylogenet. Evol. 53(3):923-934.
  524. Pavlicek J, Sauzet S, Besseau L, Coon SL, Weller JL, Boeuf G, Gaildrat P, Omelchenko MV, Koonin EV, Falcon J, Klein DC. Evolution of AANAT: expansion of the gene family in the cephalochordate amphioxus. 2010. BMC Evol. Biol. 10:154.
  525. Pavlidi N, Dermauw W, Rombauts S, Chrisargiris A, Van Leeuwen T, Vontas J. Analysis of the olive fruit fly Bactrocera oleae transcriptome and phylogenetic classification of the major detoxification gene families. 2013. PLOS One 8(6):e66533.
  526. Pawlowski J, Burki F. Untangling the phylogeny of amoeboid protists. 2009. J. Eukaryot. Microbiol. 56(1):16-25.
  527. Pease KM, Freedman AH, Pollinger JP, McCormack JE, Buermann W, Rodzen J, Banks J, Meredith E, Bleich VC, Schaefer RJ, Jones K, Wayne RK. Landscape genetics of California mule deer (Odocoileus hemionus): the roles of ecological and historical factors in generating differentiation. 2009. Mol. Ecol. 18(9):1848-1862.
  528. Perera A, Sampaio F, Costa S, Salvi D, Harris DJ. Genetic variability and relationships within the skinks Eumeces algeriensis and Eumeces schneideri using mitochondrial markers. 2012. African J. Herpetology 61(1):69-80.
  529. Perez-Losada M, Harp M, Hoeg JT, Achituv Y, Jones D, Watanabe H, Crandall KA. The tempo and mode of barnacle evolution. 2008. Mol. Phylogenet. Evol. 46(1):328-346.
  530. Perez-Losada M, Porter ML, Tazi L, Crandall KA. New methods for inferring population dynamics from microbial sequences. 2007. Infect. Genet. Evol. 7:24-43.
  531. Perez-Portela R, Bishop JDD, Davis AR, Turon X. Phylogeny of the families Pyuridae and Styelidae (Stolidobranchiata, Ascidiacea) inferred from mitochondrial and nuclear DNA sequences. 2008. Mol. Phylogenet. Evol. 0(0):???-???.
  532. Perez-Portela R, Duran S, Palacin C, Turon X. The genus Pycnoclavella (Ascidiacea) in the Atlanto-Mediterranean region: a combined molecular and morphological approach. 2007. Invertebrate Systematics 21(2):187–205.
  533. Perez-Portela R, Turon X. Phylogenetic relationships of the Clavelinidae and Pycnoclavellidae (Ascidiacea) inferred from mtDNA data. 2007. Invertebrate Biology 127(1):108–120.
  534. Perez-Portela R, Turon X. Cryptic divergence and strong population structure in the colonial invertebrate Pycnoclavella communis (Ascidiacea) inferred from molecular data. 2008. Zoology 111(2):163-178.
  535. Petitjean C, Moreira D, Lopez-Garcia P, Brochier-Armanet C. Horizontal gene transfer of a chloroplast DnaJ-Fer protein to Thaumarchaeota and the evolutionary history of the DnaK chaperone system in Archaea. 2012. BMC Evolutionary Biology 12(1):226.
  536. Phillips AJ, Siddall ME. Poly-paraphyly of Hirudinidae: many lineages of medicinal leeches. 2009. BMC Evol. Biol. 9:246.
  537. Pisanu B, Obolenskaya EV, Baudry E, Lissovsky AA, Chapuis JL. Narrow phylogeographic origin of five introduced populations of the Siberian chipmunk Tamias (Eutamias) sibiricus (Laxmann, 1769)(Rodentia: Sciuridae) established in France. 2013. Biological Invasions 1-7.
  538. Plachetzki DC, Degnan BM, Oakley TH. The origins of novel protein interactions during animal opsin evolution. 2007. PLoS ONE 2(10):e1054.
  539. Podsiadlowski L, Braband A, Mayer G. The complete mitochondrial genome of the onychophoran Epiperipatus biolleyi reveals a unique transfer RNA set and provides further support for the Ecdysozoa hypothesis. 2008. Mol. Biol. Evol. 25(1):42-51.
  540. Podsiadlowski L, Braband A, Struck TH, von Dohren J, Bartolomaeus T. Phylogeny and mitochondrial gene order variation in Lophotrochozoa in the light of new mitogenomic data from Nemertea. 2009. BMC Genomics 10:364.
  541. Pop AA, Csuzdi C, Wink M. Remarks on the molecular phylogeny of Crassiclitellata families using the mitochondrial 16S rDNA gene (Oligochaeta, Opisthopora). 2006. Advances in Earthworm Taxonomy II, Univ. Press, Cluj, pp. 143–154.
  542. Pouvreau B, Baud S, Vernoud V, Morin V, Py C, Gendrot G, Pichon JP, Rouster J, Paul W, Rogowsky PM. Duplicate maize Wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis. 2011. Plant Physiology 156:674-686.
  543. Presti RM, Oberprieler C. Evolutionary history, biogeography and eco-climatological differentiation of the genus Anthemis L. (Compositae, Anthemideae) in the circum-Mediterranean area. 2009. Journal of Biogeography 36(7):1313-1332.
  544. Prompiboon P, Lietze VU, Denton JS, Geden CJ, Steenberg T, Boucias DG. Musca domestica salivary gland hypertrophy virus, a globally distributed insect virus that infects and sterilizes female houseflies. 2010. Appl. Environ. Microbiol. 76(4):994-998.
  545. Prous M, Heidemaa M, Soon V. Empria longicornis species group: taxonomic revision with notes on phylogeny and ecology (Hymenoptera, Tenthredinidae). 2011. Zootaxa 2756:1-39.
  546. Qian G, Zhao Q, Wang A, Zhu L, Zhou K, Sun H. Two new decapod (Crustacea, Malacostraca) complete mitochondrial genomes: bearings on the phylogenetic relationships within the Decapoda. 2011. Zoological Journal of the Linnean Society 0(0):???-???.
  547. Qiu YL, Muramatsu M, Hanada S, Kamagata Y, Guo RB, Sekiguchi Y. Oligosphaera ethanolica gen. nov., sp. nov., an anaerobic, carbohydrate-fermenting bacterium isolated from methanogenic sludge, and description of Oligosphaeria classis nov. in the phylum Lentisphaerae. 2013. Int. J. Syst. Evol. Microbiol. 63:533-539.
  548. Quaiser A, Lopez-Garcia P, Zivanovic Y, Henn MR, Rodriguez-Valera F, Moreira D. Comparative analysis of genome fragments of Acidobacteria from deep Mediterranean plankton. 2008. Environ. Microbiol. 10(10):2704-2717.
  549. Quaiser A, Zivanovic Y, Moreira D, Lopez-Garcia P. Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara. 2010. The ISME Journal 5:285-304.
  550. Quintana ET, Wierzbicka K, Mackiewicz P, Osman A, Fahal AH, Hamid ME, Zakrzewska-Czerwinska J, Maldonado LA, Goodfellow M. Streptomyces sudanensis sp. nov., a new pathogen isolated from patients with actinomycetoma. 2008. Antonie Van Leeuwenhoek 93(3):305-313.
  551. Quiquand M, Yanze N, Schmich J, Schmid V, Galliot B, Piraino S. More constraint on ParaHox than Hox gene families in early metazoan evolution. 2009. Developmental Biology 328(2):173-187.
  552. Qiu YL, Li L, Wang B, Chen Z, Knoop V, Groth-Malonek M, Dombrovska O, Lee J, Kent L, Rest J, Estabrook GF, Hendry TA, Taylor DW, Testa CM, Ambros M, Crandall-Stotler B, Duff RJ, Stech M, Frey W, Quandt D, Davis CC. The deepest divergences in land plants inferred from phylogenomic evidence. 2006. Proc. Natl. Acad. Sci. USA 103(42):15511-15516.
  553. Raboni SM, Hoffmann FG, Oliveira RC, Teixeira BR, Bonvicino CR, Stella V, Carstensen S, Bordignon J, D'Andrea PS, Lemos ER, Duarte Dos Santos CN. Phylogenetic characterization of hantaviruses from wild rodents and HPS cases in the state of Parana (Southern Brazil). 2009. J. Gen. Virol. 90(9):2166-2171.
  554. Ragon M, Restoux G, Moreira D, Moller AP, Lopez-Garcia P. Sunlight-exposed biofilm microbial communities are naturally resistant to Chernobyl ionizing-radiation levels. 2011. PLoS ONE 6(7):e21764.
  555. Rastgou M, Habibi MK, Izadpanah K, Masenga V, Milne RG, Wolf YI, Koonin EV, Turina M. Molecular characterization of the plant virus genus Ourmiavirus and evidence of inter-kingdom reassortment of viral genome segments as its possible route of origin. 2009. J. Gen. Virol. 90(10):2525-2535.
  556. Ravin NV, Galachyants YP, Mardanov AV, Beletsky AV, Petrova DP, Sherbakova TA, Zakharova YR, Likhoshway YV, Skryabin KG, Grachev MA. Complete sequence of the mitochondrial genome of a diatom alga Synedraacus and comparative analysis of diatom mitochondrial genomes. 2010. Current Genetics 56(3):215-223.
  557. Ray PS, Sullivan JC, Jia J, Francis J, Finnerty JR, Fox PL. Evolution of function of a fused metazoan tRNA synthetase. 2011. Mol. Biol. Evol. 28(1):437-447.
  558. Raymann K, Bobay LM, Doak TG, Lynch M, Gribaldo S. A genomic survey of reb homologs suggests widespread occurrence of R-bodies in Proteobacteria. 2013. g3 3:505-516.
  559. Rejmanek D, Bradburd G, Foley J. Molecular characterization reveals distinct genospecies of Anaplasma phagocytophilum from diverse North American hosts. 2012. J. Med. Microbiol. 61:204-212.
  560. Riedinger V, Muller J, Stadler J, Ulrich W, Brandl R. 2012. Assemblages of bats are phylogenetically clustered on a regional scale. Basic and Applied Ecology 0:???-???.
  561. Riisberg I, Orr RJS, Kluge R, Shalchian-Tabrizi K, Bowers HA, Patil V, Edvardsen B, Jakobsen KS. Seven gene phylogeny of Heterokonts. 2009. Protist 160(2):191-204.
  562. Rimoldi S, Terova G, Brambilla F, Bernardini G, Gornati R, Saroglia M. Molecular characterization and expression analysis of Na+/H+ exchanger (NHE)-1 and c-Fos genes in sea bass (Dicentrarchus labrax, L) exposed to acute and chronic hypercapnia. 2009. J. Experimental Marine Biology and Ecology 375(1-2):32-40.
  563. Rindi F, Lam DW, Lopez-Bautista JM. Phylogenetic relationships and species circumscription in Trentepohlia and Printzina (Trentepohliales, Chlorophyta). 2009. Mol. Phylogenet. Evol. 52(2):329-339.
  564. Rindi F, McIvor L, Sherwood AR, Friedl T, Guiry MD, Sheath RG. Molecular phylogeny of the green algal order Prasiolales (Trebouxiophyceae, Chlorophyta). 2007. J. Phycol. 43(4)811-822.
  565. Rindi F, Mikhailyuk TI, Sluiman HJ, Friedl T, Lopez-Bautista JM. Phylogenetic relationships in Interfilum and Klebsormidium (Klebsormidiophyceae, Streptophyta). 2011. Mol. Phylogenet. Evol. 58(2):218-231.
  566. Rios M, Delgado E, Perez-Alvarez L, Fernandez J, Galvez P, de Parga EV, Yung V, Thomson MM, Najera R. Antiretroviral drug resistance and phylogenetic diversity of HIV-1 in Chile. 2007. J. Med. Virol. 79(6):647-656.
  567. Rius M, Pascual M, Turon X. Phylogeography of the widespread marine invader Microcosmus squamiger (Ascidiacea) reveals high genetic diversity of introduced populations and non-independent colonizations. 2008. Diversity and Distributions 14(5):818-828.
  568. Rivas GA, Ugueto GN, Schargel WE, Barros TR, Velozo P, Sanchez LE. A distinctive new species of Gonatodes (Squamata: Sphaerodactylidae) from Isla La Blanquilla, Venezuela, with remarks on the distribution of some other Caribbean Sphaerodactylid lizards. 2013. South American J. Herpetology 8(1):5-18.
  569. Roa-Varon A, Orti G. Phylogenetic relationships among families of Gadiformes (Teleostei, Paracanthopterygii) based on nuclear and mitochondrial data. 2009. Mol. Phylogenet. Evol. 52(3):688-704.
  570. Robbens S. Barely visible but highly unique: the Ostreococcus genome unveils its secrets. 2007. Dissertation.
  571. Robbens S, Petersen J, Brinkmann H, Rouze P, Van de Peer Y. Unique regulation of the calvin cycle in the ultrasmall green alga ostreococcus. 2007. J. Mol. Evol. 64(5):601-604.
  572. Rodriguez-Ezpeleta N, Brinkmann H, Roure B, Lartillot N, Lang BF, Philippe H. Detecting and overcoming systematic errors in genome-scale phylogenies. 2007. Syst. Biol. 56(3):389-399.
  573. Rodriguez-Ezpeleta N, Philippe H, Brinkmann H, Becker B, Melkonian M. Phylogenetic analyses of nuclear, mitochondrial, and plastid multigene data sets support the placement of mesostigma in the streptophyta. 2007. Mol. Biol. Evol. 24(3):723-731.
  574. Rodriguez-Robles JA, Jezkova T, Garcia MA. Evolutionary relationships and historical biogeography of Anolis desechensis and Anolis monensis, two lizards endemic to small islands in the eastern Caribbean Sea. 2007. Journal of Biogeography 34(9):1546–1558.
  575. Rodriguez-Robles JA, Jezkova T, Leal M. Genetic structuring in the threatened "Lagartijo del Bosque Seco" (Anolis cooki) from Puerto Rico. 2008. Mol. Phylogenet. Evol. 46(2):503–514.
  576. Rodriguez-Robles JA, Jezkova T, Leal M. Climatic stability and genetic divergence in the tropical insular lizard Anolis krugi, the Puerto Rican 'Lagartijo Jardinero de la Montana'. 2010. Molecular Ecology 19(9):1860-1876.
  577. Rodriguez-Serrano E, Hernandez CE, Palma RE. A new record and an evaluation of the phylogenetic relationships of Abrothrix olivaceus markhami (Rodentia: Sigmodontinae). 2007. Mamm. Biol. 73(4):309-317.
  578. Rodriguez-Serrano E, Palma RE, Hernandez CE. The evolution of ecomorphological traits within the Abrothrichini (Rodentia: Sigmodontinae): a bayesian phylogenetics approach. 2008. Mol. Phylogenet. Evol. 48(2):473-480.
  579. Roesler U, Moller A, Hensel A, Baumann D, Truyen U. Diversity within the current algal species Prototheca zopfii: a proposal for two Prototheca zopfii genotypes and description of a novel species, Prototheca blaschkeae sp. nov.. 2006. Int. J. Syst. Evol. Microbiol. 56:1419-1425.
  580. Roos J, Aggarwal RK, Janke A. Extended mitogenomic phylogenetic analyses yield new insight into crocodylian evolution and their survival of the Cretaceous–Tertiary boundary. 2007. Mol. Phylogenet. Evol. 45(2):663-673.
  581. Ropars J, Cruaud C, Lacoste S, Dupont J. A taxonomic and ecological overview of cheese fungi. 2012. International J. Food Microbiology 155(3):199-210.
  582. Rota-Stabelli O, Telford MJ. A multi criterion approach for the selection of optimal outgroups in phylogeny: recovering some support for Mandibulata over Myriochelata using mitogenomics. 2008. Mol. Phylogenet. Evol. 48(1):103-111.
  583. Roure B, Philippe H. Site-specific time heterogeneity of the substitution process and its impact on phylogenetic inference. 2011. BMC Evol. Biol. 11:17.
  584. Roure B, Rodriguez-Ezpeleta N, Philippe H. SCaFoS: a tool for selection, concatenation and fusion of sequences for phylogenomics. 2007. BMC Evol. Biol. 7(Suppl 1):S2.
  585. Rudinger M, Volkmar U, Lenz H, Groth-Malonek M, Knoop V. Nuclear DYW-Type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria. 2012. Journal of Molecular Evolution 74(1-2):37-51.
  586. Ruhfel B, Lindsay S, Davis CC. Phylogenetic placement of Rheopteris and the polyphyly of Monogramma (Pteridaceae s.l.): Evidence from rbcL sequence data. 2008. Systematic Botany 33(1):37-43.
  587. Runck AM, Moriyama H, Storz JF. Evolution of duplicated {beta}-globin genes and the structural basis of hemoglobin isoform differentiation in Mus. 2009. Mol. Biol. Evol. 26(11):2521-2532.
  588. Saitoh T, Alstrom P, Nishiumi I, Shigeta Y, Williams D, Olsson U, Ueda K. Old divergences in a boreal bird supports long-term survival through the Ice Ages. 2010. BMC Evol. Biol. 10(1):35.
  589. Salas-Leiva DE, Meerow AW, Calonje M, Griffith MP, Francisco-Ortega J, Nakamura K, Stevenson DW, Lewis CE, Namoff S. Phylogeny of the cycads based on multiple single-copy nuclear genes: congruence of concatenated parsimony, likelihood and species tree inference methods. 2013. Ann. Bot. 0:???-???.
  590. Salazar-Bravo J, Pardinas UF, D'Elia G. A phylogenetic appraisal of Sigmodontinae (Rodentia, Cricetidae) with emphasis on phyllotine genera: systematics and biogeography. 2013. Zoologica Scripta 0:???-???.
  591. Salvi D, Bombi P, Vignoli L. Phylogenetic position of the southern rock lizard Australolacerta australis within the Lacertidae radiation. 2011. African Journal of Herpetology 60(1):60-69.
  592. Salvi D, Mariottini P. Molecular phylogenetics in 2D: ITS2 rRNA evolution and sequence-structure barcode from Veneridae to Bivalvia. 2012. Mol. Phylogenet. Evol. 0:???-???.
  593. Sandve SR, Fjellheim S. Did gene family expansions during the Eocene–Oligocene boundary climate cooling play a role in Pooideae adaptation to cool climates? 2010. Molecular Ecology 19(10):2075-2088.
  594. Sandve SR, Rudi H, Asp T, Rognli OA. Tracking the evolution of a cold stress associated gene family in cold tolerant grasses. 2008. BMC Evol. Biol. 8:245.
  595. Sanna D, Addis A, Carcupino M, Francalacci P. Molecular data on two mitochondrial genes of a newly discovered crustacean species (Lightiella magdalenina, Cephalocarida). 2010. J. Marine Biological Association of the United Kingdom 90:827-829.
  596. Sato N. Phylogenomic and structural modeling analyses of the PsbP superfamily reveal multiple small segment additions in the evolution of photosystem II-associated PsbP protein in green plants. 2010. Mol. Phylogenet. Evol. 56(1):176-186.
  597. Sato Y, Hashiguchi Y, Nishida M. Evolution of multiple phosphodiesterase isoforms in stickleback involved in cAMP signal transduction pathway. 2009. BMC Syst. Biol. 3(1):23.
  598. Sato Y, Hashiguchi Y, Nishida M. Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication. 2009. BMC Evol. Biol. 9:127.
  599. Sato H, Hattori T, Lee SS, Murakami N. Two species of Strobilomyces (Boletaceae, Boletales), S. seminudus and S. hongoi sp. nov. from Japan. 2011. Mycologia 103:598-609.
  600. Sato Y, Nishida M. Electric charge divergence in proteins: insights into the evolution of their three-dimensional properties. 2008. Gene 441(1-2):3-11.
  601. Sauer J, Hausdorf B. Sexual selection is involved in speciation in a land snail radiation on crete. 2009. Evolution 63(10):2535-2546.
  602. Sauer J, Hausdorf B. Reconstructing the evolutionary history of the radiation of the land snail genus Xerocrassa on Crete based on mitochondrial sequences and AFLP markers. 2010. BMC Evol. Biol. 10:299.
  603. Scarpassa VM, Conn JE. Mitochondrial DNA detects a complex evolutionary history with pleistocene epoch divergence for the neotropical malaria vector Anopheles nuneztovari sensu lato. 2011. Am. J. Trop. Med. Hyg. 85:857-867.
  604. Schlick-Steiner BC, Steiner FM, Konrad H, Seifert B, Christian E, Moder K, Stauffer C, Crozier RH. Specificity and transmission mosaic of ant nest-wall fungi. 2008. Proc. Natl. Acad. Sci. USA 105(3):940-943.
  605. Schliewen UK, Klee B. Reticulate sympatric speciation in Cameroonian crater lake cichlids. 2004. Front. Zool. 1:5.
  606. Schmidt A, Gube M, Schmidt A, Kothe E. In silico analysis of nickel containing superoxide dismutase evolution and regulation. 2009. J. Basic Microbiol. 49(1):109-118.
  607. Schmitz JE. Isolierung von DNA und Konstruktion einer Metagenombank aus dem Sediment des Flusses Leine: partielle Sequenzierung und Annotation des Metagenoms sowie Analyse der mikrobiellen Diversitat. 2004. Dissertation, Gottingen.
  608. Schubert J, Doroszewska T, Chrzanowska M, Sztangret-Wisniewska J. Natural infection of tobacco by Colombian Datura virus in Poland, Germany and Hungary. 2006. Journal of Phytopathology 154(6):343–348.
  609. Schubert J, Fomitcheva V, Sztangret-Wisniewska J. Differentiation of Potato virus Y strains using improved sets of diagnostic PCR-primers. 2007. J. Virol. Meth. 140(1-2):66-74.
  610. Scornavacca C, Berry V, Lefort V, Douzery EJ, Ranwez V. PhySIC_IST: cleaning source trees to infer more informative supertrees. 2008. BMC Bioinformatics 9(1):413.
  611. Sehgal M, Singh TR. Identification and analysis of biomarkers for mismatch repair proteins: a bioinformatic approach. 2012. J. Natural Science Biology and Medicine 3(2):139.
  612. Seidel RA, Lang BK, Berg DJ. Phylogeographic analysis reveals multiple cryptic species of amphipods (Crustacea: Amphipoda) in Chihuahuan Desert springs. 2009. Biological Conservation 142(10):2303-2313.
  613. Sekiguchi Y, Imachi H, Susilorukmi A, Muramatsu M, Ohashi A, Harada H, Hanada S, Kamagata Y. Tepidanaerobacter syntrophicus gen. nov., sp. nov., an anaerobic, moderately thermophilic, syntrophic alcohol- and lactate-degrading bacterium isolated from thermophilic digested sludges. 2006. Int. J. Syst. Evol. Microbiol. 56(7):1621-1629.
  614. Sekiguchi Y, Muramatsu M, Imachi H, Narihiro T, Ohashi A, Harada H, Hanada S, Kamagata Y. Thermodesulfovibrio aggregans sp. nov. and Thermodesulfovibrio thiophilus sp. nov., anaerobic, thermophilic, sulfate-reducing bacteria isolated from thermophilic methanogenic sludge, and emended description of the genus Thermodesulfovibrio. 2008. Int. J. Syst. Evol. Microbiol. 58(11):2541-2548.
  615. Sekine K, Fujiwara M, Nakayama M, Takao T, Hase T, Sato N. DNA binding and partial nucleoid localization of the chloroplast stromal enzyme ferredoxin:sulfite reductase. 2007. FEBS Journal 274(8):2054-2069.
  616. Sekine K, Sakakibara Y, Hase T, Sato N. A novel variant of ferredoxin-dependent sulfite reductase having preferred substrate specificity for nitrite in the unicellular red alga Cyanidioschyzon merolae. 2009. Biochem. J. 423(1):91-98.
  617. Selbmann L, Zucconi L, Ruisi S, Grube M, Cardinale M, Onofri S. Culturable bacteria associated with Antarctic lichens: affiliation and psychrotolerance. 2010. Polar Biology 33(1):71-83.
  618. Selbmann L, de Hoog GS; Zucconi L, Isola D, Ruisi S, van den Ende AHGG, Ruibal C, de Leo F, Urzi C, Onofri S. Drought meets acid: three new genera in a dothidealean clade of extremotolerant fungi. 2008. Stud. Mycol. 61(1):1-20.
  619. Shedko SV, Chereshnev IA. Review of the gobies (Perciformes, Gobiidae) from fresh waters of the Kuril Islands. 2005. Vladimir Ya. Levanidov's Biennial Memorial Meetings 3:435-455.
  620. Shuai J, Wei W, Jiang L, Li XL, Chen N, Fang W. Mapping of the nuclear localization signals in open reading frame 2 protein from porcine circovirus type 1. 2008. Acta. Biochim. Biophys. Sin. 40:71-77.
  621. Shukalyuk AI, Golovnina KA, Baiborodin SI, Gunbin KV, Blinov AG, Isaeva VV. vasa-related genes and their expression in stem cells of colonial parasitic rhizocephalan barnacle Polyascus polygenea (Arthropoda: Crustacea: Cirripedia: Rhizocephala). 2007. Cell Biol. Intern. 31(2):97-108.
  622. Sierra M, Thomson MM, Posada D, Perez L, Aragones C, Gonzalez Z, Perez J, Casado G, Najera R. Identification of 3 phylogenetically related HIV-1 BG intersubtype circulating recombinant forms in Cuba. 2007. JAIDS 45(2):151-160.
  623. Simpson AGB, Perley TA, Lara E. Lateral transfer of the gene for a widely used marker, alpha-tubulin, indicated by a multi-protein study of the phylogenetic position of Andalucia (Excavata). 2008. Mol. Phylogenet. Evol. 47(1):366-377.
  624. Singh TR, Tsagkogeorga G, Delsuc F, Blanquart S, Shenkar N, Loya Y, Douzery EJ, Huchon D. Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny. 2009. BMC Genomics 10:534.
  625. Sinniger F, Lecroq B, Majewski W, Pawlowski J. Bowseria arctowskii gen. et sp. nov., new monothalamous foraminiferan from the Southern Ocean. 2008. Polish Polar Research 29(1):5–15.
  626. Sinniger F, Pawlowski J. The partial mitochondrial genome of Leiopathes glaberrima (Hexacorallia: Antipatharia) and the first report of the presence of an intron in COI in black corals. 2009. Galaxea, Journal of Coral Reef Studies 11(1):21-26.
  627. Skaloud P, Nemjova K, Vesela J, Cerna K, Neustupa J. A multilocus phylogeny of the desmid genus Micrasterias (Streptophyta): evidence for the accelerated rate of morphological evolution in protists. 2011. Mol. Phylogenet. Evol. 61(3):933-943.
  628. Skaloud P, St’astny J, Nemjova K, Mazalova P, Poulickova A, et al.. Molecular phylogeny of baculiform desmid taxa (Zygnematophyceae). 2012. Plant Systematics and Evolution 0(0):???-???.
  629. Skoracka A, Dabert M. The cereal rust mite Abacarus hystrix (Acari: Eriophyoidea) is a complex of species: evidence from mitochondrial and nuclear DNA sequences. 2010. Bulletin of Entomological Research 100:263-272.
  630. Sluiman HJ, Guihal C, Mudimu O. Assessing phylogenetic affinities and species delimitations in Klebsormidiales (Streptophyta): nuclear-encoded rDNA phylogenies and its secondary structure models in Klebsormidium, Hormidiella, and Entransia. 2008. J. Phycol. 44(1):183–195.
  631. Slyemi D, Moinier D, Brochier-Armanet C, Bonnefoy V, Johnson DB. Characteristics of a phylogenetically ambiguous, arsenic-oxidizing Thiomonas sp., Thiomonas arsenitoxydans strain 3AsT sp. nov. 2011. Arch. Microbiol. 193(6):439-449.
  632. Smirnov AV, Nassonova ES, Cavalier-Smith T. Correct identification of species makes the amoebozoan rRNA tree congruent with morphology for the order Leptomyxida Page 1987; with description of Acramoeba dendroida n. g., n. sp., originally misidentified as ‘Gephyramoeba sp.’. 2008. European Journal of Protistology 44(1):35-44.
  633. Smirnov AV, Nassonova ES, Chao E, Cavalier-Smith T. Phylogeny, evolution, and taxonomy of vannellid amoebae. 2007. Protist 158(3):295-324.
  634. Snijman DA, Meerow AW. Floral and macroecological evolution within Cyrtanthus (Amaryllidaceae): Inferences from combined analyses of plastid ndhF and nrDNA ITS sequences. 2010. South African Journal of Botany 76(2):217-238.
  635. Sorhannus U. Evolution of antifreeze protein genes in the diatom genus Fragilariopsis: evidence for horizontal gene transfer, gene duplication and episodic diversifying selection. 2011. Evolutionary Bioinformatics 2011(7):279-289.
  636. Sota T, Yamamoto S, Cooley JR, Hill KBR, Simon C, Yoshimura J. Independent divergence of 13- and 17-y life cycles among three periodical cicada lineages. 2013. PNAS 110:6919-6924.
  637. Spellman GM, Riddle B, Klicka J. Phylogeography of the mountain chickadee (Poecile gambeli): diversification, introgression, and expansion in response to Quaternary climate change. 2007. Molecular Ecology 16(5):1055–1068.
  638. Spellman GM, Klicka J. Phylogeography of the white-breasted nuthatch (Sitta carolinensis): diversification in North American pine and oak woodlands. 2007. Molecular Ecology 16(8):1729-1740.
  639. Sperling EA, Peterson KJ. MicroRNAs and metazoan phylogeny: big trees from little genes. 2009. Animal evolution: genomes, fossils, and trees. Book by Telford MJ, Littlewood DTJ. Chapter 15.
  640. Stankovic A, Doan K, Mackiewicz P, Ridush B, Baca M, Gromadka R, Socha P, Weglenski P, Nadachowski A, Stefaniak K. First ancient DNA sequences of the Late Pleistocene red deer (Cervus elaphus) from the Crimea, Ukraine. 2011. Quaternary International 245(2):262-267. Late Quaternary mammal ecology: insight from new approaches.
  641. Steiner FM, Schlick-Steiner BC, Konrad H, Linksvayer TA, Quek SP, Christian E, Stauffer C, Buschinger A. Phylogeny and evolutionary history of queen polymorphic Myrmecina ants (Hymenoptera: Formicidae). 2006. Eur. J. Entomol. 103(3):619–626.
  642. Steinsland H, Lacher DW, Sommerfelt H, Whittam TS. Ancestral lineages of human enterotoxigenic Escherichia coli. 2010. J. Clin. Microbiol. 48(8):2916-2924.
  643. Stelbrink B, von Rintelen T, Cliff G, Kriwet J. Molecular systematics and global phylogeography of angel sharks (genus Squatina). 2009. Mol. Phylogenet. Evol. 0(0):???-???.
  644. Stenger DC, French R. Wheat streak mosaic virus genotypes introduced to Argentina are closely related to isolates from the American Pacific Northwest and Australia. 2009. Arch. Virol. 154(2):331-336.
  645. Stenvik GE, Tandstad NM, Guo Y, Shi CL, Kristiansen W, Holmgren A, Clark SE, Aalen RB, Butenko MA. The EPIP peptide of INFLORESCENCE DEFICIENT IN ABSCISSION is sufficient to induce abscission in Arabidopsis through the receptor-like kinases HAESA and HAESA-LIKE2. 2008. Plant Cell 20(7):1805-1817.
  646. Stivaletta N, Barbieri R, Cevenini F, Lopez-Garcia P. Physicochemical conditions and microbial diversity associated with the evaporite deposits in the Laguna de la Piedra (Salar de Atacama, Chile). 2011. Geomicrobiology Journal 28(1):83-95.
  647. Stivaletta N, Lopez-Garcia P, Boihem L, Millie DF, Barbieri R. Biomarkers of endolithic communities within gypsum crusts (Southern Tunisia). 2010. Geomicrobiology Journal 27(1):101-110.
  648. Stock SP, Vandenberg J, Glazer I, Boemare N. Insect pathogens: molecular approaches and techniques. 2009. Book.
  649. Storz JF, Baze M, Waite JL, Hoffmann FG, Opazo JC, Hayes JP. Complex signatures of selection and gene conversion in the duplicated globin genes of house mice. 2007. Genetics 177(1):481-500.
  650. Storz JF, Hoffmann FG, Opazo JC, Moriyama H. Adaptive functional divergence among triplicated {alpha}-globin genes in rodents. 2008. Genetics 178(3):1623–1638.
  651. Strong EE, Kohler F. Morphological and molecular analysis of 'Melania' jacqueti Dautzenberg and Fischer, 1906: from anonymous orphan to critical basal offshoot of the Semisulcospiridae (Gastropoda: Cerithioidea). 2009. Zoologica Scripta 0(0):???-???.
  652. Struck TH, Fisse F. Phylogenetic position of Nemertea derived from phylogenomic data. 2008. Mol. Biol. Evol. 25(4):728-736.
  653. Stuken A, Campbell RJ, Quesada A, Sukenik A, Dadheech PK, Wiedner C. Genetic and morphologic characterization of four putative cylindrospermopsin producing species of the cyanobacterial genera Anabaena and Aphanizomenon. 2009. J. Plankton Res. 31(5):465-480.
  654. Stuken A, Jakobsen KS. The cylindrospermopsin gene cluster of Aphanizomenon sp. strain 10E6: organisation and recombination. 2010. Microbiology 156(Pt 8):2438-2451.
  655. Sucularli C, Ozturk M, Konu O. Phylogenetic analysis and expression profiling of TFDP1 and TFDP1L in zebrafish. 2006. FEBS Journal 273(s1):135-135.
  656. Suematsu T, Yokobori SI, Morita H, Yoshinari S, Ueda T, Kita K, Takeuchi N, Watanabe YI. A bacterial elongation factor G homologue exclusively functions in ribosome recycling in the spirochaete Borrelia burgdorferi. 2010. Mol. Microbiol. 75(6):1445-1454.
  657. Sullivan JP, Lundberg JG, Hardman M. A phylogenetic analysis of the major groups of catfishes (Teleostei: Siluriformes) using rag1 and rag2 nuclear gene sequences. 2006. Mol. Phylogenet. Evol. 41(3):636-662.
  658. Sunagawa S, DeSalvo MK, Voolstra CR, Reyes-Bermudez A, Medina M. Identification and gene expression analysis of a taxonomically restricted cysteine-rich protein family in reef-building corals. 2009. PLoS ONE 4(3):e4865.
  659. Suzuki M, Hashimoto T, Nakayama T, Yoshizaki M. Morphology and molecular relationships of Leptofauchea rhodymenioides (Rhodymeniales, Rhodophyta), a new record for Japan. 2010. Phycological Research 58(2):116-131.
  660. Svenson GJ. The Origins, Evolution, and Phylogeny of the Praying Mantises (Dictyoptera: Mantodea). 2007. Thesis, Brigham Young University.
  661. Szollosi GJ, Boussau B, Abby SS, Tannier E, Daubin V. Phylogenetic modeling of lateral gene transfer reconstructs the pattern and relative timing of speciations. 2012. PNAS 109:17513-17518.
  662. Tahirov TH, Makarova KS, Rogozin IB, Pavlov YI, Koonin EV. Evolution of DNA polymerases: an inactivated polymerase-exonuclease module in Pol epsilon and a chimeric origin of eukaryotic polymerases from two classes of archaeal ancestors. 2009. Biol. Direct 4:11.
  663. Takamatsu S, Niinomi S, Cabrera de Alvarez MG, Alvarez RE, Havrylenko M, Braun U. Caespitotheca gen. nov., an ancestral genus in the Erysiphales. 2005. Mycological Research 109(8):903-911.
  664. Takano KT, Suwito A, Gao J, Yin J. Molecular phylogeny of the cristata species group of the genus Colocasiomyia (Diptera: Drosophilidae). 2011. Low Temperature Science 69:19-28.
  665. Tamas I, Wernegreen JJ, Nystedt B, Kauppinen SN, Darby AC, Gomez-Valero L, Lundin D, Poole AM, Andersson SG. Endosymbiont gene functions impaired and rescued by polymerase infidelity at poly(A) tracts. 2008. Proc. Natl. Acad. Sci. USA 105(39):14934-14939.
  666. Tan J, Lim PE, Phang SM. Phylogenetic relationship of Kappaphycus Doty and Eucheuma J. Agardh (Solieriaceae, Rhodophyta) in Malaysia. 2012. J. Applied Phycology 0(0):???-???.
  667. Tanabe AS. Kakusan4 and Aminosan: two programs for comparing nonpartitioned, proportional and separate models for combined molecular phylogenetic analyses of multilocus sequence data. 2011. Molecular Ecology Resources 11(5):914-921.
  668. Taveira N, Rocha C, Barroso H, Bartolo I, Marcelino J, Rosado L. Evolucao molecular do gene env do HIV-2 e colapso do sistema imunitario em doentes infectados por via vertical. 2006. VII Congresso Virtual HIV/AIDS.
  669. Teich R, Zauner S, Baurain D, Brinkmann H, Petersen J. Origin and distribution of Calvin cycle fructose and sedoheptulose bisphosphatases in plantae and complex algae: a single secondary origin of complex red plastids and subsequent propagation via tertiary endosymbioses. 2007. Protist 158(3):263-276.
  670. Templeton TJ, Enomoto S, Chen WJ, Huang CG, Lancto CA, Abrahamsen MS, Zhu G. A genome-sequence survey for Ascogregarina taiwanensis supports evolutionary affiliation but metabolic diversity between a Gregarine and Cryptosporidium. 2010. Mol. Biol. Evol. 27(2):235-248.
  671. Terova G, Bernardini G, Binelli G, Gornati R, Saroglia M. cDNA encoding sequences for myostatin and FGF6 in sea bass (Dicentrarchus labrax, L.) and the effect of fasting and refeeding on their abundance levels. 2006. Domest. Anim. Endocrinol. 30(4):304-319.
  672. Terova G, Gornati R, Rimoldi S, Bernardini G, Saroglia M. Quantification of a glucocorticoid receptor in sea bass (Dicentrarchus labrax, L.) reared at high stocking density. 2005. Gene 357(2):144-151.
  673. Terova G, Rimoldi S, Bernardini G, Gornati R, Saroglia M. Sea bass ghrelin: molecular cloning and mRNA quantification during fasting and refeeding. 2008. Gen. Comp. Endocrinol. 155(2):341-351.
  674. Terova G, Rimoldi S, Brambilla F, Gornati R, Bernardini G, Saroglia M. In vivo regulation of GLUT2 mRNA in sea bass (Dicentrarchus labrax) in response to acute and chronic hypoxia. 2009. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology 152(4):306-316.
  675. Terova G, Rimoldi S, Chini V, Gornati R, Bernardini G, Saroglia M. Cloning and expression analysis of insulin-like growth factor I and II in liver and muscle of sea bass (Dicentrarchus labrax, L.) during long-term fasting and refeeding. 2007. J. Fish Biol. 70:219–233.
  676. Terova G, Rimoldi S, Cora S, Bernardini G, Gornati R, Saroglia M. Acute and chronic hypoxia affects HIF-1a mRNA levels in sea bass (Dicentrarchus labrax). 2008. Aquaculture 279(1-4):150-159.
  677. Terova G, Rimoldi S, Larghi S, Bernardini G, Gornati R, Saroglia M. Regulation of progastricsin mRNA levels in sea bass (Dicentrarchus labrax) in response to fluctuations in food availability. 2007. Biochem. Biophys. Res. Commun. 363(3):591-596.
  678. Teske PR, Beheregaray LB. Evolution of seahorses' upright posture was linked to Oligocene expansion of seagrass habitats. 2009. Biol. Lett. 5(4):521-523.
  679. Thacker CE, DM Roje. Phylogeny of Gobiidae and identification of gobiid lineages. 2011. Systematics and Biodiversity 9(4):329-347.
  680. Theologidis I, Fodelianakis S, Gaspar MB, Zouros E. Doubly uniparental inheritance (DUI) of mitochondrial DNA in Donax trunculus (Bivalvia: Donacidae) and the problem of its sporadic detection in Bivalvia. 2008. Evolution 62(4):959-970.
  681. Thines M, Voglmayr H, Goker M. Taxonomy and phylogeny of the downy mildews (Peronosporaceae). 2009. Oomycete genetics and genomics. Book by Lamour K, Kamoun S.
  682. Thompson CE, de Freitas LB, Salzano FM, de Souza ON. Molecular evolution and structural aspects of plant alcohol dehydrogenase. 2006. ISMB 2006: Fortaleza, Brazil, August 6-10.
  683. Thompson CE, Salzano FM, de Souza ON, Freitas LB. Sequence and structural aspects of the functional diversification of plant alcohol dehydrogenases. 2007. Gene 396(1):108-115.
  684. Thomson MM, Vazquez de Parga E, Vinogradova A, Sierra M, Yakovlev A, Rakhmanova A, Delgado E, Casado G, Munoz M, Carmona R, Vega Y, Perez-Alvarez L, Contreras G, Medrano L, Osmanov S, Najera R. New insights into the origin of the HIV type 1 subtype A epidemic in former Soviet Union's countries derived from sequence analyses of preepidemically transmitted viruses. 2007. AIDS Res. Hum. Retroviruses 23(12):1599-1604.
  685. Thomson MM, Vinogradova A, Delgado E, Rakhmanova A, Yakovlev A, Cuevas MT, Munoz M, Pinilla M, Vega Y, Perez-Alvarez L, Osmanov S, Najera R. Molecular epidemiology of HIV-1 in St Petersburg, Russia: predominance of subtype A, former Soviet Union variant, and identification of intrasubtype subclusters. 2009. J. Acquir. Immune Defic. Syndr. 51(3):332-339.
  686. Thummes K, Kampfer P, Jackel U. Temporal change of composition and potential activity of the thermophilic archaeal community during the composting of organic material. 2007. Systematic and Applied Microbiology 30(5):418-429.
  687. Tian X, Xie Q, Li M, Gao C, Cui Y, Xi L, Bu W. Phylogeny of pentatomomorphan bugs (Hemiptera-Heteroptera: Pentatomomorpha) based on six Hox gene fragments. 2011. Zootaxa 2888:57–68.
  688. Toju H, Fukatsu T. Diversity and infection prevalence of endosymbionts in natural populations of the chestnut weevil: relevance of local climate and host plants. 2011. Molecular Ecology 20(4):853-868.
  689. Toju H, Yamamoto S, Sato H, Tanabe AS, Gilbert GS, Kadowaki K. Community composition of root-associated fungi in a Quercus-dominated temperate forest: "codominance" of mycorrhizal and root-endophytic fungi. 2013. Ecol. Evol. 3(5):1281-1293.
  690. Trigui H, Masmoudi S, Brochier-Armanet C, Maalej S, Dukan S. Characterization of Halorubrum sfaxense sp. nov., a New Halophilic Archaeon Isolated from the Solar Saltern of Sfax in Tunisia. 2011. Int. J. Microbiol. 2011:240191.
  691. Trigui H, Masmoudi S, Brochier-Armanet C, Maalej S, Dukan S. Survival of extremely and moderately halophilic isolates of Tunisian solar salterns after UV-B or oxidative stress. 2011. Canadian J. Microbiology 57:923-933.
  692. Trucchi E, Sbordoni V. Unveiling an ancient biological invasion: molecular analysis of an old European alien, the crested porcupine (Hystrix cristata). 2009. BMC Evol. Biol. 9:109.
  693. Tsagkogeorga G, Turon X, Hopcroft RR, Tilak MK, Feldstein T, Shenkar N, Loya Y, Huchon D, Douzery EJ, Delsuc F. An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models. 2009. BMC Evol. Biol. 9:187.
  694. Tsubaki R, Kameda Y, Kato M. Pattern and process of diversification in an ecologically diverse epifaunal bivalve group Pterioidea (Pteriomorphia, Bivalvia). 2011. Mol. Phylogenet. Evol. 58(1):97-104.
  695. Turmel M, Gagnon MC, O'Kelly CJ, Otis C, Lemieux C. The chloroplast genomes of the green algae Pyramimonas, Monomastix, and Pycnococcus shed new light on the evolutionary history of prasinophytes and the origin of the secondary chloroplasts of euglenids. 2009. Mol. Biol. Evol. 26(3):631-648.
  696. Turmel M, Otis C, Lemieux C. The chloroplast genomes of the green algae Pedinomonas minor, Parachlorella kessleri and Oocystis solitaria reveal a shared ancestry between the Pedinomonadales and Chlorellales. 2009. Mol. Biol. Evol. 26(10):2317-2331.
  697. Turmel M, Otis C, Lemieux C. A deviant genetic code in the reduced mitochondrial genome of the picoplanktonic green alga Pycnococcusprovasolii. 2010. J. Mol. Evol. 70(2):203-214.
  698. Turon X, Lopez-Legentil S. Ascidian molecular phylogeny inferred from mtDNA data with emphasis on the Aplousobranchiata. 2004. Mol. Phylogenet. Evol. 33(2):309-320.
  699. Ueda S, Okubo T, Itioka T, Shimizu-kaya U, Yago M, et al.. Timing of butterfly parasitization of a plant–ant–scale symbiosis. 2012. Ecological Research 27(2):437-443.
  700. Ujiie Y, Lipps JH. Cryptic diversity in planktic foraminifera in the Northwest Pacific ocean. 2009. J. Foraminiferal Research 39(3):145-154.
  701. Ujiie Y, Kimoto K, Pawlowski J. Molecular evidence for an independent origin of modern triserial planktonic foraminifera from benthic ancestors. 2008. Marine Micropaleontology 69(3-4):334-340.
  702. Vallinoto M, Araripe J, do Rego PS, Tagliaro CH, Sampaio I, Schneider H. Tocantins river as an effective barrier to gene flow in Saguinus niger populations. 2006. Genet. Mol. Biol. vol.29, no.2, p.215-219, Sao Paulo 2006.
  703. Vandesteene L, Lopez-Galvis L, Vanneste K, Feil R, Maere S, Lammens W, Rolland F, Lunn JE, Avonce N, Beeckman T, Van Dijck P. Expansive evolution of the trehalose-6-phosphate phosphatase gene family in Arabidopsis. 2012. Plant Physiol. 160(2):884-896.
  704. Vargas-Alejo NE, Reyes-Montano EA, Lareo L. In silico approach to the evolution of ionotropic glutamate receptor gene family in four primate species. 2010. Bogota Univ. Sci. 15(3).
  705. Verbruggen H, Ashworth M, LoDuca ST, Vlaeminck C, Cocquyt E, Sauvage T, Zechman FW, Littler DS, Littler MM, Leliaert F, De Clerck O. A multi-locus time-calibrated phylogeny of the siphonous green algae. 2009. Mol. Phylogenet. Evol. 50(3):642-653.
  706. Verbruggen H, Maggs CA, Saunders GW, Le Gall L, Yoon HS, De Clerck O. Data mining approach identifies research priorities and data requirements for resolving the red algal tree of life. 2010. BMC Evol. Biol. 10:16.
  707. Verbruggen H, Theriot EC. Building trees of algae: some advances in phylogenetic and evolutionary analysis. 2008. European Journal of Phycology 43(3):229-252.
  708. Vilela RV, Machado T, Ventura K, Fagundes V, de J Silva MJ, Yonenaga-Yassuda Y. The taxonomic status of the endangered thin-spined porcupine, Chaetomys subspinosus (Olfers, 1818), based on molecular and karyologic data. 2009. BMC Evol. Biol. 9:29.
  709. Villiard E, Brinkmann H, Moiseeva O, Mallette FA, Ferbeyre G, Roy S. Urodele p53 tolerates amino acid changes found in p53 variants linked to human cancer. 2007. BMC Evol. Biol. 7:180.
  710. Vinogradova A, Gafurova E, Munoz-Nieto M, Rakhmanova A, Osmanov S, Thomson MM. Short communication: Molecular epidemiology of HIV type 1 in the Republic of Dagestan, Russian Federation: virtually uniform circulation of subtype A, former Soviet Union variant, with predominance of the V77I(PR) subvariant. 2010. AIDS Res. Hum. Retroviruses 26(4):395-400.
  711. Voelker G. Repeated vicariance of Eurasian songbird lineages since the Late Miocene. 2010. J. Biogeography 37(7):1251-1261.
  712. Voelker G, Klicka J. Systematics of Zoothera thrushes, and a synthesis of true thrush molecular systematic relationships. 2008. Mol. Phylogenet. Evol. 49(1):377-381.
  713. Voelker G, Outlaw RK. Establishing a perimeter position: speciation around the Indian Ocean Basin. 2008. J. Evol. Biol. 21(6):1779-1788.
  714. Voelker G, Outlaw RK, Bowie RCK. Pliocene forest dynamics as a primary driver of African bird speciation. 2010. Global Ecology and Biogeography 19(1):111-121.
  715. Voelker G, Outlaw RK, Reddy S, Tobler M, Bates JM, Hackett SJ, Kahindo C, Marks BD, Peterhans JC, Gnoske TP. A new species of boubou (Malaconotidae: Laniarius) from the Albertine Rift. 2010. The Auk 127(3):678-689.
  716. Voelker G, Rohwer S, Bowie RCK, Outlaw DC. Molecular systematics of a speciose, cosmopolitan songbird genus: defining the limits of, and relationships among, the Turdus thrushes. 2007. Mol. Phylogenet. Evol. 42(2):422-434.
  717. Vogt R, Oberprieler C. The genus Plagius (Compositae, Anthemideae). 2006. Willdenowia 36(1):47-68.
  718. Volkmar U, Groth-Malonek M, Heinrichs J, Muhle H, Polsakiewicz M, Knoop V. Exclusive conservation of mitochondrial group II intron nad4i548 among liverworts and its use for phylogenetic studies in this ancient plant clade. 2012. Plant Biology 14:382-391.
  719. Volkmar U, Knoop V. Introducing intron locus cox1i624 for phylogenetic analyses in bryophytes: on the issue of Takakia as sister genus to all other extant mosses. 2010. J. Mol. Evol. 70(5):506-518.
  720. Volksch B, Thon S, Jacobsen ID, Gube M. Polyphasic study of plant- and clinic-associated Pantoea agglomerans strains reveals indistinguishable virulence potential. 2009. Infection, Genetics and Evolution 9(6):1381-1391.
  721. von Rintelen K, von Rintelen T, Glaubrecht M. Molecular phylogeny and diversification of freshwater shrimps (Decapoda, Atyidae, Caridina) from ancient Lake Poso (Sulawesi, Indonesia) - the importance of being colourful. 2007. Mol. Biol. Evol. 45(3):1033-1041.
  722. von Rintelen K, Page TJ, Cai Y, Roe K, Stelbrink B, Kuhajda BR, Iliffe TM, Hughes J, von Rintelen T. Drawn to the dark side: a molecular phylogeny of freshwater shrimps (Crustacea: Decapoda: Caridea: Atyidae) reveals frequent cave invasions and challenges current taxonomic hypotheses. 2012. Mol. Phylogenet. Evol. 63(1):82-96.
  723. von Rintelen T, Glaubrecht M. Rapid evolution of sessility in an endemic species flock of the freshwater bivalve Corbicula from ancient lakes on Sulawesi, Indonesia. 2006. Biol. Lett. 2:73-77.
  724. von Rintelen T, Glaubrecht M. Three new species of the freshwater snail genus Tylomelania (Caenogastropoda: Pachychilidae) from the Malili lake system, Sulawesi, Indonesia. 2008. Zootaxa 1852:37–49.
  725. Wang C, Chen Q, Lu G, Xu J, Yang Q, Li S. Complete mitochondrial genome of the grass carp (Ctenopharyngodon idella, Teleostei): insight into its phylogenic position within Cyprinidae. 2008. Gene 424(1):96-101.
  726. Wang X, Lavrov DV. Mitochondrial genome of the homoscleromorph Oscarella carmela (Porifera, Demospongiae) reveals unexpected complexity in the common ancestor of sponges and other animals. 2007. Mol. Biol. Evol. 24(2):363–373.
  727. Wang C, Liu H, Liu Z, Wang J, Zou J, Li X. Mitochondrial genetic diversity and gene flow of common carp from main river drainages in China. 2010. Freshwater Biology 0(0):???-???.
  728. Wang X, Lavrov DV. Seventeen new complete mtDNA sequences reveal extensive mitochondrial genome evolution within the Demospongiae. 2008. PLoS ONE 3(7):e2723.
  729. Wang C, Wang J, Yang J, Lu G, Song X, et al.. Complete mitogenome sequence of black carp (Mylopharyngodon piceus) and its use for molecular phylogeny of leuciscine fishes. 2012. Molecular Biology Reports 39(5):6337-6342.
  730. Wang JR, Yan ZH, Jiang QT, Wei YM, Baum BR, Zheng YL. Sequence variations and molecular phylogenetic analyses of the HMW-GS genes from different genomes in Triticeae. 2007. Biochemical Systematics and Ecology 35(7):421-433.
  731. Weber M, Wey-Fabrizius AR, Podsiadlowski L, Witek A, Schill RO, Sugar L, Herlyn H, Hankeln T. Phylogenetic analyses of endoparasitic Acanthocephala based on mitochondrial genomes suggest secondary loss of sensory organs. 2013. Mol. Phylogenet. Evol. 66(2013):182-189.
  732. Weiss M, Markus Goker. Chapter 12 - Molecular Phylogenetic Reconstruction. 2011. The Yeasts (Fifth Edition), Pages 159-174.
  733. Wessel A, Hoch H, Asche M, von Rintelen T, Stelbrink B, Heck V, Stone FD, Howarth FG. Founder effects initiated rapid species radiation in Hawaiian cave planthoppers. 2013. PNAS 110:9391-9396.
  734. Whitehead A. The evolutionary radiation of diverse osmotolerant physiologies in killifish (Fundulus sp.). 2010. Evolution 64(7):2070-2085.
  735. Willan RC, Kohler F, Kessner V, Braby MF. Description of four new species of limestone-associated Torresitrachia land snails (Mollusca: Pulmonata: Camaenidae) from the Katherine District of the Northern Territory, with comments on their conservation. 2009. The Beagle, Records of the Museums and Art Galleries of the Northern Territory, 2009 25:???-???.
  736. Willett CS, Berkowitz JN. Viability effects and not meoitic drive cause dramatic departures from Mendelian inheritance for malic enzyme in hybrids of Tigriopus californicus populations. 2007. J. Evol. Biol. 20(3):1196–1205.
  737. Willis SC, Lopez-Fernandez H, Montana CG, Farias IP, Orti G. Species-level phylogeny of "Satan's perches" based on discordant gene trees (Teleostei: Cichlidae: Satanoperca Gunther 1862). 2012. Mol. Phylogenet. Evol. 63(3):798-808.
  738. Willis SC, Nunes M, Montana CG, Farias IP, Orti G, Lovejoy NR. The Casiquiare river acts as a corridor between the Amazonas and Orinoco river basins: biogeographic analysis of the genus Cichla. 2010. Mol. Ecol. 19(5):1014-1030.
  739. Witek A. Phylogenomische Analysen bei Metazoen: Zur Stellung der Xenoturbellida und Syndermata. 2009. Dissertation, Johannes Gutenberg-Universitat Mainz.
  740. Witek A, Herlyn H, Ebersberger I, Welch DBM, Hankeln T. Support for the monophyletic origin of Gnathifera from phylogenomics. 2009. Mol. Phylogenet. Evol. 53(3):1037-1041.
  741. Witek A, Herlyn H, Meyer A, Boell L, Bucher G, Hankeln T. EST based phylogenomics of Syndermata questions monophyly of Eurotatoria. 2008. BMC Evol. Biol. 8(1):345.
  742. Witsenburg F, Salamin N, Christe P. The evolutionary host switches of Polychromophilus: a multi-gene phylogeny of the bat malaria genus suggests a second invasion of mammals by a haemosporidian parasite. 2012. Malaria Journal 11(1):53.
  743. Wynne MJ, Verbruggen H, Angel DL. The recognition of Caulerpa integerrima (Zanardini) comb. et stat. nov. (Bryopsidales, Chlorophyta) from the Red Sea. 2009. Phycologia 48(4):291-301.
  744. Xi L, Sun J, Lu C, Liu H, Xie Z, Fukushima K, Takizawa K, Najafzadeh MJ, Hoog GS. Molecular diversity of Fonsecaea (Chaetothyriales) causing chromoblastomycosis in southern China. 2009. Med. Mycol. 47(1):27-33.
  745. Xie Q, Lin J, Qin Y, Zhou J, Bu W. Structural diversity of eukaryotic 18S rRNA and its impact on alignment and phylogenetic reconstruction. 2011. Protein and Cell 2(2):161-170.
  746. Yager DD, Svenson GJ. Patterns of praying mantis auditory system evolution based on morphological, molecular, neurophysiological, and behavioural data. 2008. Biological Journal of the Linnean Society 94(3):541–568.
  747. Yamada T, Imachi H, Ohashi A, Harada H, Hanada S, Kamagata Y, Sekiguchi Y. Bellilinea caldifistulae gen. nov., sp. nov. and Longilinea arvoryzae gen. nov., sp. nov., strictly anaerobic, filamentous bacteria of the phylum Chloroflexi isolated from methanogenic propionate-degrading consortia. 2007. Int. J. Syst. Evol. Microbiol. 57(10):2299-2306.
  748. Yamada T, Sekiguchi Y, Hanada S, Imachi H, Ohashi A, Harada H, Kamagata Y. Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi. 2006. Int. J. Syst. Evol. Microbiol. 56(6):1331-1340.
  749. Yamada T, Suzuki A, Ueda H, Ueda Y, Miyauchi K, Endo G. Successions of bacterial community in composting cow dung wastes with or without hyperthermophilic pre-treatment. 2008. Appl. Microbiol. Biotechnol. 81(4):771-781.
  750. Yamada T, Yamauchi T, Shiraishi K, Hugenholtz P, Ohashi A, Harada H, Kamagata Y, Nakamura K, Sekiguchi Y. Characterization of filamentous bacteria, belonging to candidate phylum KSB3, that are associated with bulking in methanogenic granular sludges. 2007. ISME J. 1(3):246–255.
  751. Yang JS, Yang WJ. The complete mitochondrial genome sequence of the hydrothermal vent galatheid crab Shinkaia crosnieri (Crustacea: Decapoda: Anomura): a novel arrangement and incomplete tRNA suite. 2008. BMC Genomics 9:257.
  752. Yang Y, Itoh T, Yokobori S, Itahashi S, Shimada H, Satoh K, Ohba H, Narumi I, Yamagishi A. Deinococcus aerius sp. nov., isolated from the high atmosphere. 2009. Int. J. Syst. Evol. Microbiol. 59(Pt 8):1862-1866.
  753. Yang Y, Itoh T, Yokobori S, Shimada H, Itahashi S, Satoh K, Ohba H, Narumi I, Yamagishi A. Deinococcus aetherius sp. nov., isolated from the stratosphere. 2010. Int. J. Syst. Evol. Microbiol. 60(Pt 4):776-779.
  754. Yasukochi Y, Nishida S, Han SH, Kurosaki T, Yoneda M, Koike H. Genetic structure of the Asiatic black bear in Japan using mitochondrial DNA analysis. 2009. J. Hered. 100(3):297-308.
  755. Yasuoka Y, Kobayashi M, Kurokawa D, Akasaka K, Saiga H, Taira M. Evolutionary origins of blastoporal expression and organizer activity of the vertebrate gastrula organizer gene lhx1 and its ancient metazoan paralog lhx3. 2009. Development 136(12):2005-2014.
  756. Yee B, Lafi FF, Oakley B, Staley JT, Fuerst JA. A canonical FtsZ protein in Verrucomicrobium spinosum, a member of the Bacterial phylum Verrucomicrobia that also includes tubulin-producing Prosthecobacter species. 2007. BMC Evol. Biol. 7:37.
  757. Yee B, Oertli GE, Fuerst JA, Staley JT. Reclassification of the polyphyletic genus Prosthecomicrobium to form two novel genera, Vasilyevaea gen. nov. and Bauldia gen. nov. with four new combinations: Vasilyevaea enhydra comb. nov., Vasilyevaea mishustinii comb. nov., Bauldia consociata comb. nov. and Bauldia litoralis comb. nov. . 2010. Int. J. Syst. Evol. Microbiol. 60(Pt 12):2960-2966.
  758. Yee B, Sagulenko E, Fuerst JA. Making heads or tails of the HU-proteins in the planctomycete Gemmata obscuriglobus. 2011. Microbiology 157:2012-2021.
  759. Yokobori S, Iseto T, Asakawa S, Sasaki T, Shimizu N, Yamagishi A, Oshima T, Hirose E. Complete nucleotide sequences of mitochondrial genomes of two solitary entoprocts, Loxocorone allax and Loxosomella aloxiata: implications for lophotrochozoan phylogeny. 2008. Mol. Phylogenet. Evol. 47(2):612-628.
  760. Yokobori S, Itoh T, Yoshinari S, Nomura N, Sako Y, Yamagishi A, Oshima T, Kita K, Watanabe Y. Gain and loss of an intron in a protein-coding gene in Archaea: the case of an archaeal RNA pseudouridine synthase gene. 2009. BMC Evol. Biol. 9:198.
  761. Yokobori S, Lindsay DJ, Yoshida M, Tsuchiya K, Yamagishi A, Maruyama T, Oshima T. Mitochondrial genome structure and evolution in the living fossil vampire squid, Vampyroteuthis infernalis, and extant cephalopods. 2007. Mol. Phylogenet. Evol. 44(2):898-910.
  762. Yue GH, Liew WC, Orban L. The complete mitochondrial genome of a basal teleost, the Asian arowana (Scleropages formosus, Osteoglossidae). 2006. BMC Genomics 7:242.
  763. Yokogawa T, Yahara T. Mitochondrial phylogeny certified PGL (Paternal Genome Loss) is of single origin and haplodiploidy sensu stricto (arrhenotoky) did not evolve from PGL in the scale insects (Hemiptera: Coccoidea). 2009. Genes Genet. Syst. 84(1):57-66.
  764. Yoshikawa N, Matsui M, Nishikawa K. Allozymic variation and phylogeography of two genetic types of Onychodactylus japonicus (Amphibia: Caudata: Hynobiidae) sympatric in the Kinki District, Japan. 2010. Zoological Science 27(4):344-355.
  765. Yoshikawa N, Matsui M, Tanabe S, Okayama T. Description of a new salamander of the genus Onychodactylus from Shikoku and Western Honshu, Japan (Amphibia, Caudata, Hynobiidae). 2013. Zootaxa 3693(4):441-464.
  766. Yutin N, Colson P, Raoult D, Koonin EV. Mimiviridae: clusters of orthologous genes, reconstruction of gene repertoire evolution and proposed expansion of the giant virus family. 2013. Virology Journal 10(1):106.
  767. Yutin N, Koonin EV. Evolution of DNA ligases of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes: a case of hidden complexity. 2009. Biol. Direct 4:51.
  768. Yutin N, Koonin EV. Archaeal origin of tubulin. 2012. Biology Direct 7:10.
  769. Yutin N, Makarova KS, Mekhedov SL, Wolf YI, Koonin EV. The deep archaeal roots of eukaryotes. 2008. Mol. Biol. Evol. 25(8):1619-1630.
  770. Yutin N, Raoult D, Koonin EV. Virophages, polintons, and transpovirons: a complex evolutionary network of diverse selfish genetic elements with different reproduction strategies. 2013. Virology Journal 10(1):158.
  771. Yutin N, Wolf YI, Raoult D, Koonin EV. Eukaryotic large nucleo-cytoplasmic DNA viruses: clusters of orthologous genes and reconstruction of viral genome evolution. 2009. Virol. J. 6:223.
  772. Yutin N, Wolf MY, Wolf YI, Koonin EV. The origins of phagocytosis and eukaryogenesis. 2009. Biol. Direct 4:9.
  773. Yuzawa Y, Nishihara H, Haraguchi T, Masuda S, Shimojima M, Shimoyama A, Yuasa H, Okada N, Ohta H. Phylogeny of galactolipid synthase homologs together with their enzymatic analyses revealed a possible origin and divergence time for photosynthetic membrane biogenesis. 2012. DNA Res. 19:91-102.
  774. Zhang C, Huang Y. Complete mitochondrial genome of Oxya chinensis (Orthoptera, Acridoidea). 2008. Acta Biochimica et Biophysica Sinica 40(1):7–18.
  775. Zhang H, Hoffmann F, He J, He X, Kankasa C, Ruprecht R, West JT, Orti G, Wood C. Evolution of subtype C HIV-1 Env in a slowly progressing Zambian infant. 2005. Retrovirology 2:67.
  776. Zhang H, Hoffmann F, He J, He X, Kankasa C, West JT, Mitchell CD, Ruprecht RM, Orti G, Wood C. Characterization of HIV-1 subtype C envelope glycoproteins from perinatally infected children with different courses of disease. 2006. Retrovirology 3:73.
  777. Zhang M, Yan L, Zhu G, Holifield M, Todd D, Zhang S. Streptococcus troglodytidis sp. nov., isolated from a foot abscess of a chimpanzee (Pan troglodytes). 2013. Int. J. Syst. Evol. Microbiol. 63:449-453.
  778. Zhoua Z, Ye H, Huang Y, Shi F. The phylogeny of Orthoptera inferred from mtDNA and description of Elimaea cheni (Tettigoniidae: Phaneropterinae) mitogenome. 2010. J. Genetics and Genomics 37(5):315-324.
  779. Zielske S, Glaubrecht M, Haase M. Origin and radiation of rissooidean gastropods (Caenogastropoda) in ancient lakes of Sulawesi. 2011. Zoologica Scripta 40(3):221-237.
  780. Zuccarello GC, Price N, Verbruggen H, Leliaert F. Analysis of a plastid multigene dataset and the phylogenetic position of the marine macroalga Caulerpa filiformis (Chlorophyta). 2009. J. Phycol. 0(0):???-???.
  781. Zuccon D, Cibois A, Pasquet E, Ericson PGP. Nuclear and mitochondrial sequence data reveal the major lineages of starlings, mynas and related taxa. 2006. Mol. Phylogenet. Evol. 41(2):333-344.

.

Some works citing my inventions:

  1. Ahmed MR, Faizal M, Prasad K, Cho YJ, Kim CG, Lee YH. Exploiting the orbital motion of water particles for energy extraction from waves. 2010. Journal of Mechanical Science and Technology 24(4): 943-949.
  2. Faizal M, Ahmed MR, Lee YH. On utilizing the orbital motion in water waves to drive a Savonius rotor. 2010. Renewable Energy 35(1):164-169
  3. Gordon L. Wave-driven water pump has no moving parts. 2011. Machine Design, http://machinedesign.com/article/wave-driven-water-pump-has-no-moving-parts-0609.
  4. Zullah MA, Lee YH. Performance evaluation of a direct drive wave energy converter using CFD. 2012. Renewable Energy 0(0):???-???.
  5. Zullah MA, Prasad D, Ahmed MR, Lee YH. Performance analysis of a wave energy converter using numerical simulation technique. 2010. Sci. China Tech. Sci. 53(1):13-18.

.

Many Thanks! - But having an income would be nice, too ...

.


Copyright (C) 1997-2010 by Gangolf Jobb
All Rights Reserved